Table 1. Summary of 16S rRNA gene sequencing of beaver ceacum and feacal samples for bacterial and archaeal diversity analysis.
Sample | Location | Reads (Total) | Reads (Unique) | Observed OTUs* | Choa1* | Phylogenetic Diversity* |
---|---|---|---|---|---|---|
Bacterial Diversity | ||||||
Male 1 | ceacum | 46139 | 1531 | 1465 | 1614 | 38.1 |
Male 1 | feaces | 39284 | 1440 | 1446 | 1590 | 37.8 |
Male 2 | ceacum | 40887 | 1471 | 1450 | 1628 | 37.7 |
Male 2 | feaces | 50937 | 1518 | 1489 | 1614 | 38.2 |
Female 1 | ceacum | 41073 | 1506 | 1446 | 1598 | 37.3 |
Female 1 | feaces | 52784 | 1549 | 1400 | 1634 | 36.2 |
Female 2 | ceacum | 48632 | 1539 | 1413 | 1619 | 36.9 |
Female 2 | feaces | 33993 | 1489 | 1417 | 1631 | 37.0 |
Archaeal Diversity | ||||||
Male 1 | ceacum | 168809 | 183 | 151 | 196 | 4.88 |
Male 1 | feaces | 78041 | 161 | 131 | 174 | 4.14 |
Male 2 | ceacum | 66616 | 118 | 101 | 131 | 3.63 |
Male 2 | feaces | 72143 | 135 | 113 | 151 | 4.26 |
Female 1 | ceacum | 97907 | 159 | 132 | 185 | 4.59 |
Female 1 | feaces | 76270 | 193 | 172 | 229 | 5.11 |
Female 2 | ceacum | 29361 | 107 | 100 | 118 | 3.59 |
Female 2 | feaces | 70642 | 187 | 181 | 213 | 5.15 |
*Bacterial diversity comparisons were carried out after randomly subsampling 33993 sequences to ensure an equal number of reads were used in all subsequent analysis. Archaeal sequences were similarly subsampled to 29361.