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. 2016 May 26;11(5):e0156457. doi: 10.1371/journal.pone.0156457

Table 1. Summary of 16S rRNA gene sequencing of beaver ceacum and feacal samples for bacterial and archaeal diversity analysis.

Sample Location Reads (Total) Reads (Unique) Observed OTUs* Choa1* Phylogenetic Diversity*
Bacterial Diversity
Male 1 ceacum 46139 1531 1465 1614 38.1
Male 1 feaces 39284 1440 1446 1590 37.8
Male 2 ceacum 40887 1471 1450 1628 37.7
Male 2 feaces 50937 1518 1489 1614 38.2
Female 1 ceacum 41073 1506 1446 1598 37.3
Female 1 feaces 52784 1549 1400 1634 36.2
Female 2 ceacum 48632 1539 1413 1619 36.9
Female 2 feaces 33993 1489 1417 1631 37.0
Archaeal Diversity
Male 1 ceacum 168809 183 151 196 4.88
Male 1 feaces 78041 161 131 174 4.14
Male 2 ceacum 66616 118 101 131 3.63
Male 2 feaces 72143 135 113 151 4.26
Female 1 ceacum 97907 159 132 185 4.59
Female 1 feaces 76270 193 172 229 5.11
Female 2 ceacum 29361 107 100 118 3.59
Female 2 feaces 70642 187 181 213 5.15

*Bacterial diversity comparisons were carried out after randomly subsampling 33993 sequences to ensure an equal number of reads were used in all subsequent analysis. Archaeal sequences were similarly subsampled to 29361.