Table 2. Primer sequences of the virulence related genes and EF1α (used as a reference gene) used for qRT-PCR.
Target gene | Forward primer sequence (5’ to 3’) | Reverse primer sequence (5’ to 3’) | Amplicon size |
---|---|---|---|
Chitin synthase | GGCACAAGGATGAACAACTGGGA | GGAGCTGGATTGAGCATAGGGATC | 99 bp |
Cell wall protein | GGCAAGCCTTACACCATCCGCTAC | TGTAGTCAGAGAGATCATCGGAGG | 91 bp |
Mitochondrial carrier protein | CCGCGTTGAGATGCAGAGCAAGAA | GACGCCGTTGGTCTCGTAAATGTAC | 97 bp |
Glucanosyltransferase | GGCTACATCTGCGGCCAAGACAAG | GAGCACATGCTGTAGGCACCATAG | 89 bp |
G protein β subunit | GGTCGACCGATAGGAGGCACC | GTGGACCTTGTTGGTGGTATAGGC | 86 bp |
Xylanase | CCGGCGACGATGTGATGCGA | CCCAGGTGTGGTTGCTCGCT | 82 bp |
Pectate lyase | GCGGTGCTTTCCATGCTAGCG | GACGAGCTTTCCGTAGTCTTCGGC | 98 bp |
Polygalacturonase | CTCGCCACTCGACTTGACCTGG | TGAAGCTGTGGTCTGCCCAGTAG | 101 bp |
EF1α | AGCTCGGTAAGGGTTCCTTC | TCCAGAGAGCAATATCGATGG | 93 bp |