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. 2016 May 26;11(5):e0156490. doi: 10.1371/journal.pone.0156490

Table 2. Primer sequences of the virulence related genes and EF1α (used as a reference gene) used for qRT-PCR.

Target gene Forward primer sequence (5’ to 3’) Reverse primer sequence (5’ to 3’) Amplicon size
Chitin synthase GGCACAAGGATGAACAACTGGGA GGAGCTGGATTGAGCATAGGGATC 99 bp
Cell wall protein GGCAAGCCTTACACCATCCGCTAC TGTAGTCAGAGAGATCATCGGAGG 91 bp
Mitochondrial carrier protein CCGCGTTGAGATGCAGAGCAAGAA GACGCCGTTGGTCTCGTAAATGTAC 97 bp
Glucanosyltransferase GGCTACATCTGCGGCCAAGACAAG GAGCACATGCTGTAGGCACCATAG 89 bp
G protein β subunit GGTCGACCGATAGGAGGCACC GTGGACCTTGTTGGTGGTATAGGC 86 bp
Xylanase CCGGCGACGATGTGATGCGA CCCAGGTGTGGTTGCTCGCT 82 bp
Pectate lyase GCGGTGCTTTCCATGCTAGCG GACGAGCTTTCCGTAGTCTTCGGC 98 bp
Polygalacturonase CTCGCCACTCGACTTGACCTGG TGAAGCTGTGGTCTGCCCAGTAG 101 bp
EF1α AGCTCGGTAAGGGTTCCTTC TCCAGAGAGCAATATCGATGG 93 bp