Table 3.
Key physicochemical parameters of LBD2, LBDv and pGFP peptides.
| Peptide | Sequence | NetC a | H b | HR (%) c | GRAVY d | μH e |
|---|---|---|---|---|---|---|
| LBD2 | Ac-Y(CSFNVTPKFKRWQLYFRGRMWC)P-NH2 | 5 | 0.619 | 41 | −0.6042 | 0.103 |
| LBDv | Ac-Y(CKFKVKPKFKRWKLKFKGRMWC)P-NH2 | 10 | 0.398 | 41 | −0.9409 | 0.072 |
| pGFP | Ac-TTGKLPVPWPTLVTTFSYGVQCFS-NH2 | 1 | 0.732 | 37 | 0.3333 | 0.314 |
a NetC means net charge. Lys (K), Arg (R), His (H), and C-terminal amidation were assigned with +1 charge. Asp (D) and Glu (E) were assigned with −1 charge; b H represents mean hydrophobicity that is derived from dividing total hydrophobicity (sum of hydrophobicity indices of all residue) by the number of residues; c HR means hydrophobic ratio; d GRAVY means the Grand Average hydropathy value of the peptide; e μH represents mean hydrophobic moment.