Table 2.

Summary of chromosomal SNP and INDEL distribution for KRICE_CORE

Chromosome	SNP				INDEL
	Total		High quality		Total		High quality
	Count	Densitya	Count	Density	Count	Density	Count	Density
1	1,492,529	34.5	245,749	5.7	157,701	3.6	34,662	0.8
2	1,194,215	33.2	219,868	6.1	123,316	3.4	28,870	0.8
3	1,117,000	30.7	227,031	6.2	116,347	3.2	30,925	0.8
4	1,482,884	41.8	151,464	4.3	118,490	3.3	19,101	0.5
5	1,136,915	37.9	190,680	6.4	98,439	3.3	23,019	0.8
6	1,279,651	41.0	175,920	5.6	117,347	3.8	22,733	0.7
7	1,268,980	42.7	152,153	5.1	112,520	3.8	20,766	0.7
8	1,323,731	46.5	148,873	5.2	113,720	4.0	18,831	0.7
9	969,987	42.2	128,492	5.6	85,643	3.7	16,566	0.7
10	1,081,145	46.6	141,153	6.1	91,306	3.9	17,727	0.8
11	1,425,491	49.1	148,897	5.1	128,449	4.4	17,902	0.6
12	1,352,277	49.1	116,249	4.2	115,237	4.2	15,040	0.5
Total	15,124,805	40.5	2,046,529	5.5	1,378,515	3.7	266,142	0.7

^aDensity = SNP/INDEL count/length of the chromosome