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. 2012 Dec 22;5:37. doi: 10.1186/1939-8433-5-37

Table 1.

Functional classification of yield-related genes in rice

Trait Regulated Sub-component trait Name of the gene Locus Id Predicted gene product as per RGAP 7 (Ouyang et al.2007) References
Grain number per panicle Panicle development LAX1 LOC_Os01g61480 helix-loop-helix DNA-binding domain containing protein Komatsu et al. 2003a; Oikawa and Kyozuka, 2009
OsSPL14 LOC_Os08g39890 OsSPL14 - SBP-box gene family member Miura et al. 2010
FZP LOC_Os07g47330 AP2 domain containing protein Komatsu et al. 2003b
Rate of spikelet formation DEP1 LOC_Os09g26999 keratin-associated protein 5-4 Huang et al. 2009
SP1 LOC_Os11g12740 peptide transporter PTR2 Li et al. 2009
APO1 LOC_Os06g45460 OsFBX202 - F-box domain containing protein Ikeda-Kawakatsu et al. 2009
LOG LOC_Os01g40630 uncharacterized protein PA4923 Kurakawa et al. 2007
OsCKX2 LOC_Os01g10110 cytokinin dehydrogenase Ashikari et al. 2005
Duration of panicle differentiation RCN1 LOC_Os11g05470 Phosphatidylethanolamine-binding protein Nakagawa et al. 2002
RFL LOC_Os04g51000 transcription factor FL Rao et al. 2008
Ghd7 LOC_Os07g15770 CCT motif family protein Xue et al. 2008
Tillering LRK1 LOC_Os02g05980 phytosulfokine receptor Zha et al. 2009
OsTB1 LOC_Os03g49880 TCP family transcription factor Takeda et al. 2003
D10 LOC_Os01g54270 transposon protein Arite et al. 2007
Htd1 LOC_Os04g46470 carotenoid cleavage dioxygenase 7 Zou et al. 2006
D3 LOC_Os06g06050 F-box domain and LRR containing protein Ishikawa et al. 2005
MOC1 LOC_Os06g40780 Monoculm 1 Li et al. 2003
Grain weight Grain width GW2 LOC_Os02g14720 expressed protein Song et al. 2007
Grain length and size GS3 LOC_Os03g29380 conserved hypothetical protein Fan et al. 2006
Grain filling GIF1 LOC_Os04g33740 glycosyl hydrolase Wang et al. 2008
Plant Height Sd1 LOC_Os01g66100 gibberellin 20 oxidase 2 Sasaki et al. 2002
OsBRI1 LOC_Os01g52050 systemin receptor SR160 precursor Morinaka et al. 2006
OsEATB LOC_Os09g28440 AP2 domain containing protein Qi et al. 2011