Table 1.
General sequencing statistics for Tongil and its parental genomes
| Variety | Number of reads | Total read length (bp) | Mapped read length (bp) | Sequencing depth (×) | Coveragea)(%) | SNP frequency (SNPs/kb) |
|---|---|---|---|---|---|---|
| Tongil | 199,543,820 | 17,339,883,560 | 330,933,489 | 47 | 88.8 | 5.77 |
| Yukara | 114,615,268 | 12,429,060,750 | 345,058,384 | 34 | 92.6 | 0.49 |
| IR8 | 109,304,614 | 11,790,909,253 | 327,065,806 | 32 | 87.7 | 6.22 |
| TN1 | 105,708,026 | 11,299,286,038 | 326,132,058 | 30 | 87.5 | 6.04 |
a)Coverage to Nipponbare genome sequence.
Sequencing and mapping against the Nipponbare reference genome.