Table 2.
Summary of significant differential expressed genes known miRNA under saline, alkaline, and saline-alkaline stresses
| MiR-name | Fold-change(log2) | Target | Anotation | ||
|---|---|---|---|---|---|
| AS | ASS | NSS | |||
| lus-miR159c | - | - | −1.0931792↓ | Lus10036103[a], Lus10016550, Lus10027189, Lus10017946, Lus10008685[a], Lus10028176, Lus10013688, Lus10035275, Lus10026142[a], Lus10009780, Lus10026787[a] | Myb domain protein, Mitochondrial transcription termination factor family protein, Transcription regulators |
| lus-miR160a/e/f | - | 1.20840613↑ | −3.66411747↓ | Lus10024753, Lus10024754, Lus10023519, Lus10019940, Lus10026510, Lus10016090, Lus10040403, Lus10009770, Lus10021467 | Auxin response factor |
| lus-miR160b/d | - | 1.20719184↑ | −3.66660396↓ | ||
| lus-miR160j | - | 1.20846291↑ | |||
| lus-miR160h/i | - | 1.20203167↑ | −3.69976116↓ | ||
| lus-miR169c | - | −1.13471672↓ | - | Lus10017991, Lus10041986, | Jasmonate-zim-domain protein, GRAS family transcription factor |
| lus-miR169e/i | - | −1.05752449↓ | - | ||
| lus-miR171j | - | - | −1.02479034↓ | Lus10024029, Lus10041721, Lus10004353, Lus10028934 | GRAS family transcription factor |
| lus-miR319a | - | - | −1.46989392↓ | Lus10036103[a], Lus10008685[a], Lus10026142[a], Lus10026787[a] | Myb domain protein |
| lus-miR393a/c | - | 1.12123117↑ | - | Lus10031991, Lus10035160 | Auxin signaling F-box |
| lus-miR393b/d | 1.00414957↑ | - | |||
| lus-miR394a | - | 2.65759041↑ | −3.63085489↓ | Lus10000973, Lus10029731, Lus10011354, Lus10022009, Lus10028656, Lus10028656, Lus10006975, Lus10015775, Lus10001312, Lus10003117, Lus10037030, | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, Galactose oxidase/kelch repeat superfamily protein, Signal transduction histidine kinase, FGGY family of carbohydrate kinase, Jasmonate-zim-domain protein |
| lus-miR394b | - | 2.77702791↑ | −3.82176614↓ | ||
| lus-miR398a | 2.51091239↑ | 2.69813582↑ | - | - | - |
| lus-miR408a | 1.71297796↑ | 1.63630636↑ | - | Lus10018938, Lus10020012, Lus10028640, Lus10028641 | Plantacyanin, Chloroplast import apparatus |
Abbreviations: AS Alkaline stress, AS2 Alkaline-salt stress, CK Control, Lus Linum usitatissimum, NSS Neutral salt stress, ↑, Upregulated; ↓, Downregulated; [a], the same target genes of lus-miR159c and lus-miR319a