Table 2.
Refined SNPs obtained from PhD-SNP, PANTHER, SNPs&GO, Fathmm, and PolyPhen-2 based classification systems.
| Amino acid change | PhD-SNP | PANTHER | SNPs&GO | Fathmm | PolyPhen-2 |
|---|---|---|---|---|---|
| G367R | Disease | Neutral | Neutral | Tolerated | Benign |
| A348G | Disease | Disease | Disease | Tolerated | Probably damaging |
| H341Y | Disease | Disease | Disease | Tolerated | Probably damaging |
| R324L | Disease | Disease | Disease | Tolerated | Probably damaging |
| A307V | Disease | Neutral | Disease | Tolerated | Benign |
| T296R | Disease | Neutral | Neutral | Tolerated | Benign |
| V279G | Disease | Disease | Disease | Tolerated | Benign |
| G275A | Neutral | Disease | Disease | Tolerated | Probably damaging |
| V270M | Neutral | Disease | Neutral | Tolerated | Possibly damaging |
| R264W | Disease | Disease | Disease | Tolerated | Possibly damaging |
| I251N | Disease | Disease | Disease | Tolerated | Possibly damaging |
| S231P | Disease | Neutral | Neutral | Tolerated | Possibly damaging |
| L224F | Disease | Neutral | Neutral | Tolerated | Probably damaging |
| L251V | Disease | Neutral | Neutral | Tolerated | Probably damaging |
| R202W | Disease | Disease | Disease | Tolerated | Benign |
| F173L | Disease | Neutral | Neutral | Tolerated | Possibly damaging |
| K170N | Neutral | Disease | Neutral | Tolerated | Probably damaging |
| F145L | Disease | Neutral | Neutral | Tolerated | Benign |
| L143P | Disease | Disease | Disease | Tolerated | Probably damaging |
| R130C | Disease | Disease | Disease | Tolerated | Benign |
| R122W | Disease | Disease | Neutral | Damaging | Benign |
| M118K | Disease | Disease | Disease | Damaging | Benign |
| P116S | Neutral | Disease | Neutral | Tolerated | Probably damaging |
| D108N | Disease | Neutral | Neutral | Tolerated | Probably damaging |
| R91H | Disease | Neutral | Neutral | Tolerated | Benign |
| E89D | Disease | Neutral | Disease | Tolerated | Benign |
| E78K | Disease | Neutral | Neutral | Tolerated | Benign |
| P70S | Neutral | Neutral | Neutral | Tolerated | Probably damaging |
| R40P | Disease | Unknown | Neutral | Tolerated | Benign |
| G31E | Neutral | Unknown | Neutral | Tolerated | Probably damaging |
| A15P | Disease | Unknown | Neutral | Tolerated | Benign |
| G14F | Disease | Unknown | Neutral | Tolerated | Benign |
| N13K | Disease | Unknown | Neutral | Tolerated | Benign |
| G12E | Disease | Unknown | Neutral | Tolerated | Benign |
| V9E | Disease | Unknown | Neutral | Tolerated | Benign |