Table 2.
PLV Genome Organisation.
| Segment | Protein Encoding | G+C Content (%) | ORF Length (bp) | Predicted Protein Length (aa) | % Pairwise Identity with CORV (nt/aa) |
|---|---|---|---|---|---|
| 1 | VP1 (Pol) | 40.8 | 3873 | 1290 | 78.1/91.9 |
| 2 | VP2 (T2) | 41.8 | 2850 | 949 | 79.9/94.3 |
| 3 | VP3 (OC1) | 42.2 | 2217 | 738 | 74.7/85.8 |
| 4 | NS1 (TuP) | 48.0 | 1770 | 589 | 78.0/89.8 |
| 5 | VP5 (OC2) | 45.3 | 1584 | 527 | 79.1/95.3 |
| 6 | VP4 (Cap) | 44.4 | 1932 | 643 | 78.1/90.4 |
| 7 | NS2 (ViP) | 46.2 | 1116 | 371 | 81.1/92.7 |
| 8 | VP7 (T13) | 46.8 | 1065 | 352 | 79.2/94.3 |
| 9 | VP6 (Hel)/NS4 | 46.0 | 1035 | 344 | 78.0/72.6 |
| 10 | NS3/NS3a | 46.7 | 717 | 238 | 81.2/92.0 |
Pol = Polymerase; OC1 = Outer capsid protein; T2 = Inner core protein (T2 symmetry); Cap = capping enzyme; TuP = tubule forming protein or tubular protein (NS1); OC2 = outer capsid protein 2; T13 = outer core protein (T13 symmetry); ViP = viral inclusion body protein (NS2); Hel = helicase protein.