Table 1.

Plant materials and number of biological replicates used in this experiment, with reference to the depository raw files.

Genotype	Bio-reps #	RAW files
ELF3 TAP–MS
elf3-2 [ELF3pro:ELF3-6xHis-3xFLAG][CCA:LUC]	2	20130321_120 min_DN_ELF3_ELF3; MN_20150427_1
elf4-2 elf3-2 [ELF3pro:ELF3-6xHis-3xFLAG][CCA:LUC]	2	MN_20150427_5; MN_20150427_6
phyB-9 elf3-2 [ELF3pro:ELF3-6xHis-3xFLAG][CCA:LUC]	2	20140908_MN_7; MN_20150427_2
ELF4 TAP–MS
elf4-3 [ELF4pro:ELF4-6xHis-3xFLAG][CCA:LUC]	4	20140908_MN_ELF4_1; 20140908_MN_ELF4_2; 20140908_MN_ELF4_3; 20140908_MN_ELF4_4;
elf3-1 elf4-3 [ELF4pro:ELF4-6xHis-3xFLAG][CCA:LUC]	3	20140908_MN_3; 20140908_MN_6; 20140908_MN_14
phyB-9 elf4-3 [ELF4pro:ELF4-6xHis-3xFLAG][CCA:LUC]	3	20140908_MN_1; 20140908_MN_5; 20140908_MN_13
PCH1 TAP–MS
Col [35S:PCH1-6xHis-3xFLAG][CCA:LUC]	3	MN_20130904_Col; 20140908_MN_4; 20140908_MN_16
elf3-2 [35S:PCH1-6xHis-3xFLAG][CCA:LUC]	2	20131008_MN_elf_2; 20140908_MN_2
elf4-2 [35S:PCH1-6xHis-3xFLAG][CCA:LUC]	2	MN_20130904_ELF4_2; 20140908_MN_9
phyB-9 [35S:PCH1-6xHis-3xFLAG][CCA:LUC]	2	20131008_MN_phyB_9; 20140908_MN_10
GFP TAP–MS
Col [35S:GFP-6xHis-3xFLAG][CCA:LUC]	4	20140908_MN_GFP_1; 20140908_MN_GFP_2; 20140908_MN_GFP_4; 20130321_120 min_DN_GFP-14