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Effect of decreasing number of reads on significantly differentially expressed genes while maintaining all four replicates.
| Number of reads (ATCC10792) (%) | Differentially expressed genes (FDR 5%, two-fold) | Genes commonly detected with 100% reads |
|---|---|---|
| 100 | 887 | 100% (887) |
| 75 | 843 | 95% (803) |
| 50 | 793 | 89.4% (722) |
| 25 | 696 | 78.5% (611) |
| 10 | 574 | 64.7% (487) |
| 5 | 449 | 50.6% (376) |
