Table 3. Test objects superimposed by SUPALM using different angular data ranges N sh for the calculations of the scattering amplitudes.
The objects are the same as in Table 1 ▸. The default number of spherical harmonics (L max = 5) was used for the tests. Values in bold correspond to the default setting for the angular data range.
| No. | Template object | Matched object | MW (kDa) | NSD/NCC (N sh = 5) | NSD/NCC (N sh = 6) | NSD/NCC (N sh = 7) | NSD/NCC (N sh = 8) | NSD/NCC (N sh = 9) |
|---|---|---|---|---|---|---|---|---|
| 1 | 2a38 (PDB) | z1z2 (DAMMIF) | 21 | 1.95/0.97 | 1.87/0.96 | 1.79/0.96 | 1.80/0.95 | 1.79/0.94 |
| 2 | 1got (PDB) | G protein (GASBOR) | 40 | 1.17/0.77 | 1.16/0.76 | 1.14/0.76 | 1.15/0.76 | 1.14/0.75 |
| 3 | 1o6v (PDB) | Internalin (DAMMIN) | 50 | 2.13/0.96 | 2.02/0.95 | 1.94/0.95 | 1.96/0.94 | 1.95/0.94 |
| 4 | 4uis (PDB) | EMD-2974 (EMD map) | 140 | 5.33/0.95 | 3.91/0.94 | 3.75/0.93 | 3.74/0.93 | 3.73/0.92 |
| 5 | 1hqk (PDB) | Lumazine synthase (DAMMIN) | 960 | 1.28/0.88 | 1.25/0.87 | 1.24/0.87 | 1.24/0.87 | 1.23/0.86 |
| 6 | 4v4w (PDB) | 70S ribosome (MONSA) | 2150 | 1.30/0.97 | 1.29/0.95 | 1.27/0.94 | 1.28/0.94 | 1.27/0.93 |