Table 2. Summary statistics of ancient populations analyzed in this study.
| Population pairwise FST (upper diagonal) and p-values of the Fisher exact test (lower diagonal) * | Genetic diversity | Neutrality test | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lima | Wari | Ychsma | N | H | h | π | Tajima’s D | p-value | Fu’s FS | p-value | |
| Lima | 0 | 0.1905 | 0.6658 | 9 | 8 | 0.9722 (0.0640) | 0.002331 (0.001272) | -0.13498 | 0.47000 | 1.44409 | 0.67400 |
| Wari | -0.05197 (0.64865–1) | 0 | 0.2144 | 10 | 9 | 0.9778 (0.0540) | 0.002492 (0.001340) | 0.18623 | 0.62400 | 1.08278 | 0.60900 |
| Ychsma | -0.06111 (0.87387–1) | -0.00770 (0.32432–0.97296) | 0 | 15 | 13 | 0.9810 (0.0308) | 0.002159 (0.001117) | 0.31343 | 0.66300 | 0.31237 | 0.51100 |
* p-values were adjusted for multiple comparisons (Bonferroni correction) using the R script p.adjust (The R Project for Statistical Computing, https://www.r-project.org/).
N: Number of individuals, H: Number of haplotypes, h: Haplotype diversity, π: Nucleotide diversity