Table 1.
Small molecule | RNAC | RNA1 | RNA2 | RNA3 | RNA4 | RNA5 | DNA hairpin |
1 | >30 | 1.3 ± 0.1 | 9.4 ± 0.1 | 3.4 ± 0.1 | 1.3 ± 0.2 | 7.4 ± 0.7 | >30 |
2 | >2 | >20 | 1.5 ± 0.2 | 2.7 ± 0.3 | >20 | 1.0 ± 0.1 | 0.2 ± 0.02 |
Targaprimir-96 (3) | >4 | 1.2 ± 0.3 | 0.9 ± 0.2 | 0.085 ± 0.01; 0.020 ± 0.007* | 1.2 ± 0.3 | 1.5 ± 0.2 | >50 |
Kd values are reported in micromolar.
This measurement was completed in the presence of PEG 8000, a molecular crowding agent that allows in vitro conditions to mimic the molecularly crowded environment in cells.