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. 2016 Jun 2;7:778. doi: 10.3389/fpls.2016.00778

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Copyright © 2016 Duan, Ren, Li, Liu, Song, Chen, Huang, Hou and Li.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Microsynteny analysis of the GGP genes in representative eudicots. The following parts are shown from left to right. (A) Protein maximum likelihood (ML) tree: The tree was constructed by ML, and bootstrap values were calculated with 1,000 replications. The protein sequences used for the tree were listed in Supplementary Table S7. (B) Microsynteny analysis: the microsynteny of the GGPs in A. thaliana, A. trichopoda, C. papaya, P. trichocarpa, V. vinifera and B. rapa was evaluated with the CoGe comparative genomic tool (see in Supplementary Table S5) and indicated a possible GGP collinear relationship. BraVTC2 retained three copies and BraVTC5 lost two copies during fractionation.