Table 1. Association analysis results (P-values < 0.05).
SNP | Positiona | MAFb | Allelic Association | Genotypic Association |
---|---|---|---|---|
rs67250895 | 2303160 | 0.22 | 0.03124 | 0.14792 |
rs139215365 | 2427684 | 0.07 | 0.25035 | 0.03999 |
rs16870466 | 2799648 | 0.11 | 0.04946 | 0.05745 |
rs1497457 | 2799759 | 0.31 | 0.03285 | 0.19374 |
rs2934527 | 2947498 | 0.48 | 0.04338 | 0.09179 |
rs2934528 | 2947877 | 0.32 | 0.03903 | 0.07172 |
rs183225473 | 3045672 | 0.04 | 0.03913 | 0.03913 |
rs146531224 | 3046004 | 0.20 | 0.03438 | 0.03438 |
rs117273909 | 3182971 | 0.44 | 0.03913 | 0.03913 |
rs111916055 | 3187995 | 0.03 | 0.03438 | 0.03438 |
rs16871553 | 3269602 | 0.39 | 0.02924 | 0.02924 |
rs73733752 | 3278780 | 0.54 | 0.03913 | 0.03913 |
rs61712864 | 3317668 | 0.18 | 0.04626 | 0.25960 |
rs73733769 | 3326276 | 0.03 | 0.02653 | 0.02653 |
rs73032754 | 3428448 | 0.04 | 0.00948 | 0.00965 |
novel | 3459187 | 0.13 | 0.03913 | 0.03913 |
rs117494736 | 3459291 | 0.10 | 0.02326 | 0.02326 |
rs537539844 | 3491460 | 0.03 | 0.03893 | 0.03893 |
rs35450818 | 3491486 | 0.03 | 0.00737 | 0.03819 |
rs34560950 | 3512343 | 0.50 | 0.00737 | 0.00737 |
rs62336074 | 3513171 | 0.47 | 0.02838 | 0.02838 |
rs35155570 | 3518273 | 0.03 | 0.02409 | 0.02409 |
rs828332 | 3591325 | 0.03 | 0.00737 | 0.00737 |
rs12517904 | 3608064 | 0.03 | 0.00004 | 0.16992 |
rs76205392 | 3617948 | 0.03 | 0.03893 | 0.03893 |
rs71577554 | 3618245 | 0.03 | 0.02686 | 0.02686 |
rs10475220 | 3618387 | 0.22 | 0.02686 | 0.02686 |
rs10475221 | 3618393 | 0.03 | 0.02686 | 0.02686 |
rs78040936 | 3630480 | 0.20 | 0.02686 | 0.02686 |
novel | 4003967 | 0.04 | 0.02645 | 0.02645 |
Map positions obtained from NCBI (GRCh37/hg19).
Maximum likelihood estimate of minor allele frequency from founders (FREQ [S.A.G.E., v6.0.1]).