Table 2.
Enriched KEGG pathways in down- and upregulated genes (fold change > 1.7; p < 0.05).Only categories significantly associated (p value < 0.05) are considered. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways, number of enriched genes, p value, enrichment factor, and list of the genes enriched in each pathway are reported.
| KEGG pathway | Number of genes | p value | Enrichment factor | Gene list |
|---|---|---|---|---|
| Gene set: downregulated genes | ||||
| Tight junction | 2 | 0.0261 | 8.0 | Actn3, Csda |
| Melanogenesis | 3 | 8.18E − 4 | 16.5 | Camk2b, Gnas, and Prkaca |
| Long-term depression | 2 | 0.00871 | 14.3 | Ryr1, Gnas |
| Arrhythmogenic right ventricular cardiomyopathy (ARVC) | 2 | 0.00789 | 15.0 | Cacnb1, Actn3 |
| GnRH signaling pathway | 3 | 7.52E − 4 | 17.0 | Camk2b, Gnas, and Prkaca |
| Prostate cancer | 2 | 0.0119 | 12.2 | Hsp90ab1, E2f2 |
| Gap junction | 2 | 0.0119 | 12.2 | Gnas, Prkaca |
| Galactose metabolism | 2 | 0.00103 | 42.4 | Gaa, Pfkm |
| Glioma | 2 | 0.00692 | 16.1 | E2f2, Camk2b |
| Dilated cardiomyopathy | 3 | 5.91E − 4 | 18.4 | Cacnb1, Gnas, and Prkaca |
| Metabolic pathways | 9 | 2.11E − 4 | 4.34 | Adssl1, St3gal3, Cox10, Gaa, Atp6v0a1, Gamt, Pfkm, Ndufa10, and Idh3a |
| Oxidative phosphorylation | 3 | 0.00266 | 10.9 | Cox10, Atp6v0a1, and Ndufa10 |
| Calcium signaling pathway | 4 | 3.64E − 4 | 11.9 | Ryr1, Camk2b, Gnas, and Prkaca |
| Insulin signaling pathway | 3 | 0.00196 | 12.2 | Pygm, Tsc2, and Prkaca |
| Lysosome | 2 | 0.0185 | 9.61 | Gaa, Atp6v0a1 |
| Taste transduction | 2 | 0.00499 | 19.1 | Gnas, Prkaca |
| Progesterone-mediated oocyte maturation | 2 | 0.0157 | 10.5 | Hsp90ab1, Prkaca |
| Parkinson's disease | 2 | 0.0343 | 6.89 | Ube2l3, Ndufa10 |
| Long-term potentiation | 2 | 0.00809 | 14.9 | Camk2b, Prkaca |
| Hedgehog signaling pathway | 2 | 0.00421 | 20.8 | Csnk1e, Prkaca |
| Wnt signaling pathway | 3 | 0.00276 | 10.8 | Csnk1e, Camk2b, and Prkaca |
| Vascular smooth muscle contraction | 2 | 0.0212 | 8.94 | Gnas, Prkaca |
| MAPK signaling pathway | 3 | 0.0132 | 6.11 | Mapt, Cacnb1, and Prkaca |
| Starch and sucrose metabolism | 2 | 0.00284 | 25.4 | Pygm, Gaa |
|
| ||||
| Gene set: upregulated genes | ||||
| Chemokine signaling pathway | 4 | 1.09E − 4 | 16.2 | Ccl21c, Ccl21a, Ccl9, and Ccl7 |
| Cytokine-cytokine receptor interaction | 5 | 1.43E − 5 | 16.2 | Tnfrsf12a, Ccl21c, Ccl21a, Ccl9, and Ccl7 |