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. 2016 Mar 25;44(10):4934–4946. doi: 10.1093/nar/gkw195

Table 1. Details of the aligned reads.

Total aligned reads to repeat-unmasked genome-LS sample 8004825
Total aligned reads to repeat-masked genome-LS sample 3127180
Total aligned reads to repeat-unmasked genome-HS sample 7709018
Total aligned reads to repeat-masked genome-HS sample 3075179
Total unique matched reads to repeat-unmasked genome-LS sample 2434346
Total unique matched reads to repeat-masked genome-LS sample 2154145
Total unique matched reads to repeat-unmasked genome-HS sample 3497070
Total unique matched reads to repeat-masked genome-HS sample 2339764
Intronic mCAR reads 1059675
Antisense mCAR reads (antisense to intronic, exonic, UTR) 16428
Intergenic mCAR reads 87971
Exonic mCAR reads 832
UTR mCAR reads 4024
Total intronic mCARs 306
Total antisense mCARs 126
Total intergenic mCARs 289
Total exonic mCARs 89
Total UTR mCARs 216
Intronic mCARs covered by ESTs 98%
Antisense mCARs covered by ESTs 48%
Intergenic mCARs covered by ESTs 23%