Table 2.
Bacterial taxa retrieved from ILMAH surfaces sampled at various time points of human occupation
Bacterial taxon | Number of sequences from sampling time at | |||||||
---|---|---|---|---|---|---|---|---|
Day 0 | Day 13 | Day 20 | Day 30 | |||||
Total | Viable | Total | Viable | Total | Viable | Total | Viable | |
Acidobacteria | 15 | 11 | 89 | 47 | 15 | 49 | 41 | |
Actinobacteria | 2803 | 1156 | 17631 | 10697 | 14865 | 4806 | 23314 | 17663 |
Bacteroidetes | 2733 | 538 | 2418 | 169 | 1719 | 1517 | 538 | |
Candidatus Saccharibacteria | 91 | 52 | 106 | 39 | 56 | 99 | 7 | |
Chlamydiae | 22 | 23 | 31 | 8 | ||||
Chloroflexi | 94 | 42 | 49 | 59 | 19 | 28 | 43 | 11 |
Cyanobacteria | 129 | 53 | 567 | 29 | 96 | 1704 | 541 | |
Deinococcus-Thermus | 50 | 9 | 7 | 1 | 3 | 2 | 4 | |
Firmicutes | 6303 | 4719 | 17282 | 9604 | 13910 | 2212 | 23312 | 15422 |
Fusobacteria | 11 | 54 | 1 | 13 | 111 | 5 | ||
α-proteobacteria | 15956 | 4082 | 2959 | 1196 | 396 | 29 | 1893 | 1881 |
β-proteobacteria | 10664 | 3051 | 1835 | 980 | 261 | 39 | 1242 | 1065 |
δ-proteobacteria | 21 | 5 | 113 | 88 | 34 | 8 | 13 | 16 |
ε-proteobacteria | 3 | 6 | 1 | 2 | 2 | |||
γ-proteobacteria | 3088 | 1279 | 3561 | 1777 | 3997 | 27 | 2340 | 412 |
Parcubacteria | 19 | 54 | 3 | 5 | 13 | |||
Others (4 phyla) | 1 | 3 | 21 | 20 | 5 | 19 | 3 | |
Unclassified bacteria | 131 | 63 | 247 | 620 | 71 | 10 | 215 | 150 |