Table 4.
Distribution of lsBIN Mapped Functionally Different Genomic Regions
| Filtering | n Bins | Gene Function-Related Regions |
CpG Content-Related Regions |
||||||
|---|---|---|---|---|---|---|---|---|---|
| n Within Enhancers | n Within Promoters | % in Enhancers | % in Promoters | n Within Shores | n Within Islands | % Within Shores | % Within Islands | ||
| No filtering | 11 524 145 | 830 367 | 267 412 | 7.21% | 2.32% | 328 156 | 36 957 | 2.85% | 0.32% |
| R > 0.11 | 723 029 | 61 910 | 16 965 | 8.56% | 2.35% | 37 988 | 1218 | 5.25% | 0.17% |
| R > 0.2 | 123 984 | 9715 | 2965 | 7.84% | 2.39% | 5667 | 353 | 4.57% | 0.28% |
| R > 0.3 | 35 205 | 2587 | 834 | 7.35% | 2.37% | 1325 | 100 | 3.76% | 0.28% |
| R > 0.4 | 12 224 | 890 | 311 | 7.28% | 2.54% | 479 | 34 | 3.92% | 0.28% |
| R > 0.5 | 4020 | 277 | 113 | 6.89% | 2.81% | 177 | 17 | 4.40% | 0.42% |
| R > 0.6 | 1085 | 73 | 36 | 6.73% | 3.32% | 61 | 6 | 5.62% | 0.55% |
| R > 0.7 | 218 | 5 | 4 | 2.29% | 1.83% | 9 | 4 | 4.13% | 1.83% |
The data provided genome wide and according to filtering conditions, Rrepeated. Spearman ρ between Rrepeated and percentage of bins mapped to enhancers, 1.00 (P < .001), and percentage of bins. Mapped to CGIs, 0.964 (P < .0005).