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. Author manuscript; available in PMC: 2016 Jun 3.
Published in final edited form as: Methods Mol Biol. 2012;819:29–42. doi: 10.1007/978-1-61779-465-0_3

Table 1. Available ET tools.

Name/URL Type Purpose Input Output
Evolutionary Trace Results http://mammoth.bcm.tmc.edu/ETserver.html Web server Functional site prediction PDB ID ET analyses files
Evolutionary Trace Report maker http://mammoth.bcm.tmc.edu/report_maker Web server Functional site prediction PDB ID or Uniprot accession number PDF report, ET analyses files
Evolutionary Trace Viewer (ETV) http://mammoth.bcm.tmc.edu/traceview Molecular viewer, Web application, Web server Functional site prediction, visualization ET analyses (.etvx file), PDB ID 3D molecular graphics, ET analyses files, multiple sequence alignment, evolutionary tree
PyMOL ETV http://mammoth.bcm.tmc.edu/traceview/HelpDocs/PyETVHelp/pyInstructions.html Molecular viewer Functional site prediction, visualization ET rank data, PDB, PyMOL scripts 3D molecular graphics
Evolutionary Trace Annotation (ETA) server http://mammoth.bcm.tmc.edu/eta Web server Functional annotation PDB ID EC and GO annotations, 3D templates, PDB matches