Table 1.
Differentially represented OTUs between samples collected at time 0 and 6 months after ICR
| OTUs | Closest species (% of sequence similarity) | Time 0 | REC6 | REM6 | p Value |
|---|---|---|---|---|---|
| 28 | Streptococcus mitis (100%) | 11.41±5.6 | 1.63±1.0 | 0.44±0.2 | 0.009 |
| 58 | Undibacterium oligocarboniphilum (100%) | 4.58±2.5 | 0.8±0.3 | 0.30±0.1 | 0.021 |
| 68 | Sphingomonas melonis (100%) | 1.81±1.0 | 0.41±0.2 | 0.11±0.1 | 0.027 |
| 64 | Gemella haemolysans (100%) | 1.78±0.8 | 0.30±0.2 | 0.06±0.0 | 0.006 |
| 87 | Clostridium lituseburense (98%) | 1.70±0.9 | 0.00±0.0 | 0.01±0.0 | 0.006 |
| 91 | Thermus scotoductus (100%) | 1.53±0.7 | 0.73±0.4 | 0.06±0.0 | 0.028 |
| 76 | Mesorhizobium australicum (99%) | 1.41±0.7 | 0.18±0.1 | 0.07±0.0 | 0.008 |
| 124 | Granulicatella adiacens (100%) | 1.21±0.7 | 0.18±0.1 | 0.03±0.0 | 0.028 |
| 250 | Staphylococcus warneri (100%) | 0.72±0.4 | 0.12±0.0 | 0.06±0.0 | 0.041 |
| 142 | Granulicatella elegans (100%) | 0.63±0.3 | 0.04±0.0 | 0.02±0.0 | 0.006 |
| 224 | Bradyrhizobium yuanmingense (100%) | 0.56±0.2 | 0.07±0.1 | 0.03±0.0 | 0.002 |
| 227 | Sediminibacterium salmoneum (96%) | 0.46±0.2 | 0.02±0.0 | 0.05±0.0 | 0.011 |
| 226 | Sediminibacterium salmoneum (98%) | 0.38±0.2 | 0.00±0.0 | 0.02±0.0 | 0.032 |
| 243 | Pseudomonas flavescens (100%) | 0.28±0.2 | 0.01±0.0 | 0.01±0.0 | 0.027 |
| 256 | Rhodospirillum rubrum (86%) | 0.21±0.1 | 0.06±0.0 | 0±0 | 0.035 |
| 233 | Turicibacter sanguinis (100%) | 0.08±0.0 | 0±0 | 0.02±0.0 | 0.017 |
| 15 | Eubacterium coprostanoligenes (92%) | 0.03±0.0 | 0±0 | 0±0 | 0.033 |
| 10 | Clostridium nexile (100%) | 0.14±0.0 | 4.79±1.5 | 0.83±0.4 | 0.005 |
| 9 | Blautia wexlereae (100%) | 0.32±0.1 | 2.81±1.2 | 4.17±0.8 | 0.036 |
| 12 | Dorea longicatena (100%) | 0.40±0.2 | 0.47±0.2 | 3.18±0.7 | 0.002 |
| 53 | Sutterella wadsworthensis (100%) | 0.08±0.0 | 0.27±0.1 | 0.64±0.2 | 0.025 |
| 199 | Ruminococcus schinkii (97%) | 0.02±0.0 | 0.03±0.0 | 0.24±0.1 | 0.003 |
| 288 | Bacteroides dorei (99%) | 0±0 | 0.03±0.0 | 0.14±0.0 | 0.035 |
| 241 | Desulfotomaculum guttoideum (98%) | 0.04±0.0 | 0.00±0.0 | 0.13±0.0 | 0.01 |
| 1 | Bacteroides plebeius (100%) | 0.25±0.2 | 0±0 | 2.41±0.9 | 0.029 |
| 153 | Clostridium bolteae (95%) | 0±0 | 0±0 | 0.49±0.2 | 0.034 |
Shadeless and grey-shaded lines indicate respectively increased OTUs in samples either collected at time 0 or time 6. Statistics was assessed by analysis of variance. Only significant data (p<0.05) are presented.
ICR, ileocolonic resection; OTUs, operational taxonomic units; REC. recurrence; REM, remission.