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. Author manuscript; available in PMC: 2016 Jun 6.
Published in final edited form as: Gastric Cancer. 2014 Apr 21;18(2):280–287. doi: 10.1007/s10120-014-0370-2

Table 1.

Methylation-specific polymerase chain reaction (PCR) (MSP) primers used in the present study

Genes Primer sequence (5′–3′) Products size
CHFR Flank Up AAAAATAAGGAAAAGATGTAGAYG 167
CHFR Flank Down TAAAAATTTCCRATTAAAAAAACCC
CHFR Me-Sense AGATGTAGACGTTTTTTTTTGGAGGC 100
CHFR Me-Anti-Sense ATTTCCGATTAAAAAAACCCCTTAACG
CHFR Un-Sense AGATGTAGATGTTTTTTTTTGGAGGT 115
CHFR Un-Anti-Sense AAATTTCCAATTAAAAAAACCCCTTAACA
MGMT Flank Up GYGTTTYGGATATGTTGGGATAGTT 135
MGMT Flank Down AAACTCCRCACTCTTCCRAAAAC
MGMT Me-Sense TTTCGACGTTCGTAGGTTTTCGC 81
MGMT Me-Anti-Sense GCACTCTTCCGAAAACGAAACG
MGMT Un-Sense TTTGTGTTTTGATGTTTGTAGGTTTTTGT 93
MGMT Un-Anti-Sense AACTCCACACTCTTCCAAAAACAAAACA
FANCF Flank Up GGTTTTAAGTATTATTTAYGTTAGTATTT 165
FANCF Flank Down CCTCTTACCTCCACTAATTATACAAC
FANCF Me-Sense AGTATTTGGGATTTCGTTATCGTGC 99
FANCF Me-Anti-Sense GAATAAAACCATACCGACCAAAACG
FANCF Un-Sense TATGTTAGTATTTGGGATTTTGTTATTGTGT 106
FANCF Un-Anti-Sense ACAAATAAAACCATACCAACCAAAACA
MLH1 Flank Up GGAGTGAAGGAGGTTAYGGGTAAGT 182
MLH1 Flank Down AAAAACRATAAAACCCTATACCTAATCTATC
MLH1 Me-Sense ACGTAGACGTTTTATTAGGGTCGC 115
MLH1 Me-Anti-Sense CCTCATCGTAACTACCCGCG
MLH1 Un-Sense TTTTGATGTAGATGTTTTATTAGGGTTGT 124
MLH1 Un-Anti-Sense ACCACCTCATCATAACTACCCACA
RASSf1 Flank Up GTTTAGTTTGGATTTTGGGGGAG 144
RASSf1 Flank Down CCCRCAACTCAATAAACTCAAACTC
RASSf1 Me-Sense GGGTTCGTTTTGTGGTTTCGTTC 76
RASSf1 Me-Anti-Sense TAACCCGATTAAACCCGTACTTCG
RASSf1 Un-Sense GGGGTTTGTTTTGTGGTTTTGTTT 81
RASSf1 Un-Anti-Sense AACATAACCCAATTAAACCCATACTTCA