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. Author manuscript; available in PMC: 2016 Jun 6.
Published in final edited form as: Nat Methods. 2009 May 3;6(6):458–464. doi: 10.1038/nmeth.1327
Supplementary File Title
Supplementary Note Glossary
Supplementary Figures Supplementary figures 1-3
Software Zip file of code written in IDL for calculating strain rates in
a domain of tissue
Supplementary Video 1 Tracked cell trajectories and membrane shapes in
Drosophila amnioserosa. Video to accompany Figure 4a.
Video duration is 50 mins, with frames at 2 min intervals.
Details are as in Figure 4.
Supplementary Video 2 Tracked cell trajectories and membrane shapes in
Drosophila germband. Video to accompany Figure 4d.
Video duration is 15 mins, with frames at 30s intervals.
Details are as in Figure 4.
Supplementary Video 3 Tracked cell trajectories and membrane shapes in
zebrafish trunk ectoderm. Video to accompany Figure 4g.
Video duration is 50 mins, with frames at 2 min intervals.
Details are as in Figure 4.
Supplementary Video 4 Cellular simulation of a domain dominated by cell shape
change. Video to accompany Figure 2a simulation. Video
duration is 50 mins, with frames every minute.
Supplementary Video 5 Cellular simulation of a domain dominated by cell
intercalation. Video to accompany Figure 2b simulation.
Video duration is 50 mins, with frames every minute.
Supplementary Video 6 Tissue deformations and rotations in Drosophila
amnioserosa. Video to accompany Figure 4b. Video
duration is 50 mins, with frames at 2 min intervals. Details
are as in Figure 4.
Supplementary Video 7 Cell shape deformations in Drosophila amnioserosa.
Video to accompany Figure 5a. Video duration is 50 mins,
with frames at 2 min intervals. Details are as in
Figure 5.
Supplementary Video 8 Cell intercalation deformations in Drosophila
amnioserosa. Video to accompany Figure 5b. Video
duration is 50 mins, with frames at 2 min intervals. Details
are as in Figure 5.
Supplementary Video 9 Tissue deformations and rotations in Drosophila
germband. Video to accompany Figure 4e. Video duration
is 15 mins, with frames at 30s intervals. Details are as in
Figure 4.
Supplementary Video 10 Cell shape deformations in Drosophila germband. Video
to accompany Figure 5d. Video duration is 15 mins, with
frames at 30s intervals. Details are as in Figure 5.
Supplementary Video 11 Cell intercalation deformations in Drosophila germband.
Video to accompany Figure 5e. Video duration is 15 mins,
with frames at 30s intervals. Details are as in Figure 5.
Supplementary Video 12 Tissue deformations and rotations in zebrafish trunk
ectoderm. Video to accompany Figure 4h. Video duration is
50 mins, with frames at 2 min intervals. Details are as in
Figure 4.
Supplementary Video 13 Cell shape deformations in zebrafish trunk ectoderm.
Video to accompany Figure 5g. Video duration is 50 mins,
with frames at 2 min intervals. Details are as in Figure 5.
Supplementary Video 14 Cell intercalation deformations in zebrafish trunk
ectoderm. Video to accompany Figure 5h. Video duration is
50 mins, with frames at 2 min intervals. Details are as in Figure 5.