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. Author manuscript; available in PMC: 2016 Jun 6.
Published in final edited form as: Genomics. 2012 Jan 15;99(4):209–219. doi: 10.1016/j.ygeno.2012.01.002

Figure 5. The prediction of gene expression using epigenetic information.

Figure 5

A) The average DNA methylation at TSS and 5′-UTR and the average expression of autosomal genes that are active (red) or inactive (green) in all samples. X chromosome genes are plotted separately in Supplemental Figure 12. B) Predicted vs. observed expression level of 1,000 testing genes (green: inactive, red: active; black partially active). The prediction is based on a linear regression model trained with DNA methylation, cohesin, CTCF and histone modification data of 3,100 genes.