Table 6.
Orthologs of the Esx and PE/PPE family proteins in the four NTM genomes.
| Locus | esx/pe/ppe gene tag | Percentage homology of Esx and PE/PPE amino acid sequences deducted from the different NTM to M. bovis | |||
|---|---|---|---|---|---|
| M. komanii sp. nov. | M. malmesburii sp. nov | M. fortuitum | M. nonchromogenicum | ||
| ESX-1 | esxA/Rv3875/Mb3905 | 48.75 | 50 | 75.79 | 71.58 |
| esxB/Rv3874/Mb3905 | 57.73 | 57.73 | 64 | 64 | |
| pe35/Rv3872/Mb3902 | 51.55 | 51.55 | 52.22 | 52.22 | |
| ppe68/Rv3873/Mb3903 | 63.65 | 47.79 | 59.44 | 56.10 | |
| ESX-2 | esxC/Rv3890c/Mb3919c | no | no | no | no |
| esxD/Rv3891c/Mb3920c | no | no | no | no | |
| ppe69/Rv3892c/Mb3921c | no | no | no | no | |
| pe36/Rv3893c/Mb3922c | no | no | no | no | |
| ESX-3 | esxG/Rv0287/Mb0295 | 78.35 | 78.35 | 81.5 | 81.05 |
| esxH/Rv0288/Mb0296 | 76 | 76 | 75.79 | 77.94 | |
| pe5/Rv0285/Mb0293 | 72.28 | 72.28 | 74.54 | 74.51 | |
| ppe4/Rv0286/Mb0294 | no | no | no | no | |
| ESX-4 | esxT/Rv3444c/Mb3474c | 73.4 | 73.96 | 73.96 | 73.96 |
| esxU/Rv3445c/Mb3475c | 60.75 | 56.01 | 60.42 | 60.42 | |
| ESX-5 | esxM/Rv1792/Mb1820 | no | no | no | no |
| esxN/Rv1793/Mb1821 | no | no | no | 85.11 | |
| ppe25/Rv1787/Mb1815 | no | no | no | no | |
| pe18/Rv1788/Mb1816 | no | no | no | no | |
| ppe26/Rv1789/Mb1817 | no | no | no | no | |
| ppe27/Rv1790/Mb1818 | no | no | no | no | |
| pe19/Rv1791/Mb1819 | no | no | no | No | |
no, no ortholog detected.