Table 1. Summary of QTLs detected for immature and mature fruit length using MapQTL and R/qtl in F3 families in spring 2013 and autumn 2014.
| QTL | Chr | Data for QTL analysis | QTL package | 1.5 LOD interval (CM) |
Chromosome locations (Mb) |
Peak location (Mb) | Interval(Mb) | LOD score | % Expl. | SNP NO. | Consistently QTL | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Left | Right | start | end | ||||||||||
| fl1.1 | 1 | 2014, autumn | R/qtl | 35.83 | 41.91 | 7.27 | 9.18 | 8.78 | 1.92 | 5.95 | * | 19 | FS1.1, Weng et al.2 |
| mfl1.1 | 1 | 2013, spring | R/qtl | 61.31 | 70.50 | 13.30 | 16.46 | 13.51 | 3.16 | 11.73 | * | 8 | FS1.1, Weng et al.2; fl1.1, Cheng et al.28; mfl1.1, Bo et al.10; mfl1.2, Wei et al.9 |
| 1 | 2013, spring | MapQTL | 64.35 | 74.70 | 13.47 | 17.43 | 16.48 | 3.97 | 6.23 | 17.34 | 12 | ||
| 1 | 2014, autumn | R/qtl | 69.35 | 74.02 | 13.41 | 17.66 | 15.15 | 4.25 | 10.12 | * | 9 | ||
| 1 | 2014, autumn | MapQTL | 71.99 | 73.35 | 16.48 | 16.84 | 16.52 | 0.36 | 5.94 | 20.08 | 4 | ||
| fl3.1 | 3 | 2013, spring | R/qtl | 41.85 | 50.10 | 9.76 | 10.17 | 10.12 | 0.41 | 7.11 | * | 9 | FS3.1, Weng et al.2 |
| fl3.2 | 3 | 2014, autumn | MapQTL | 118.18 | 139.49 | 22.71 | 28.20 | 26.37 | 5.50 | 12.81 | 36.76 | 23 | FS3.2, Weng et al.2;fl3.2, Yuan et al. 2008;mfl3.1, Wei et al.9 |
| 3 | 2013, spring | MapQTL | 118.52 | 136.51 | 22.72 | 27.67 | 26.37 | 4.95 | 15.59 | 38.78 | 27 | ||
| 3 | 2013, spring | R/qtl | 121.70 | 130.14 | 25.37 | 27.02 | 26.37 | 1.65 | 13.80 | * | 20 | ||
| 3 | 2014, autumn | R/qtl | 121.70 | 130.14 | 25.37 | 27.02 | 25.83 | 1.65 | 15.69 | * | 20 | ||
| mfl3.1 | 3 | 2013, spring | R/qtl | 29.28 | 38.40 | 7.57 | 9.03 | 8.09 | 1.45 | 6.36 | * | 13 | FS3.1, Weng et al.2 |
| mfl3.2 | 3 | 2013, spring | R/qtl | 121.70 | 130.14 | 25.37 | 27.02 | 25.86 | 1.65 | 18.38 | * | 20 | FS3.2, Weng et al.2;fl3.2 Yuan et al. 2008;mfl3.1, Wei et al.9 |
| 3 | 2013, spring | MapQTL | 123.05 | 137.32 | 25.54 | 28.10 | 26.37 | 2.56 | 14.16 | 36.16 | 32 | ||
| 3 | 2014, autumn | MapQTL | 135.70 | 142.67 | 27.51 | 29.98 | 26.37 | 2.48 | 10.05 | 30.87 | 15 | ||
| 3 | 2014, autumn | R/qtl | 136.85 | 143.48 | 27.98 | 30.54 | 29.98 | 2.57 | 12.99 | * | 12 | ||
| fl4.1 | 4 | 2014, autumn | R/qtl | 36.13 | 39.31 | 11.45 | 11.71 | 11.54 | 0.26 | 4.34 | * | 4 | FS4.1, Weng et al.2;fl4.1 Yuan et al. 2008;mfl4.1, Wang et al.29;fl4.1, Bo et al.10 |
| fl6.1 | 6 | 2013, spring | MapQTL | 31.78 | 41.24 | 11.11 | 15.50 | 14.13 | 4.39 | 6.43 | 17.76 | 26 | fl6.1, Bo et al.10; fl6.1, Wei et al.9 |
| 6 | 2014, autumn | R/qtl | 33.47 | 36.17 | 11.64 | 14.13 | 12.72 | 2.49 | 4.76 | * | 22 | ||
| 6 | 2014, autumn | MapQTL | 35.50 | 37.86 | 12.72 | 14.83 | 13.99 | 2.11 | 5.10 | 16.49 | 17 | ||