Table 2. Putative selective sweeps identified in the hapFLK-based analysis.

CHR	Reg (Mb)	Flanking SNPs of SNPs	Number	Raw P-value	q-value	Gutiérrez-Gil et al.8	Fariello et al.7
2	82.8–87.7	OAR2_88062818.1–s35257.1	97	0.034	0.574	83.1–85.3 Mb	81.2–87.3 Mb
3	150.5–154.2	s26286.1–OAR3_165050963.1	68	0.029	0.545	153.4–154.5 Mb	151.4–156.9 Mb
5	46.5–49.1	s59995.1–OAR5_53435489.1	48	0.007	0.213	–	47.3–49.3 Mb
6	4.3–49.9	OAR6_6402059.1– OAR6_55087517_X.1	860	0.000	0.000	39.3–39.5 Mb	35.9–38.3 Mb
	52.3–52.6	OAR6_57796972.1–OAR6_58069886.1	7	0.049	0.604	–	–
	64.5–74.3	OAR6_70844973.1–OAR6_81183719.1	180	0.016	0.389	69.9–70.5 Mb	67.9–70.3 Mb
	112.1–115.6	OAR6_127397796.1–s33220.1	58	0.026	0.52	–	–
10	29.1–29.3	OAR10_29159858.1–OAR10_29381795.1	7	0.044	0.598	–	29.4–29.7 Mb
13	43.6–50.9	s39429.1–OAR13_55448085.1	104	0.006	0.192	48.9–52.0 Mb	43.3–51.2
	68.8–74.9	OAR13_74074760.1–OAR13_80614774_X.1	97	0.025	0.524	–	–
16	24.7–25.2	s59907.1–OAR16_27501072.1	13	0.043	0.598	–	–
17	61.2–67.1	s25636.1–s73670.1	34	0.039	0.591	–	–
24	6.9–11.0	OAR24_8063846.1–s18520.1	44	0.042	0.598	–	–
25	24.8–45.3	OAR25_25923466.1–OAR25_48288071_X.1	353	0.008	0.249	–	–
26	0.16–3.8	OAR26_222715_X.1–s54858.1	47	0.030	0.547	–	–

Those sweeps consistently found with BayeScan are shown in bold.

In the two columns at the right part of the table, we show evidence of positional concordance with previously reported selective sweeps⁷,⁸. CHR = chromosome.