Skip to main content
. 2016 Mar 14;9(4):e32356. doi: 10.5812/jjm.32356

Appendix 1. The Sequencing Results of Every Band in the DGGE Profiles a.

Band Number Species Closest relative ID in NCBI Size, bp Identities, %
1-1,2-4,3-4,4-4,6-4,7-4,8-4, 9-3,11-4,12-4,13-4,14-1 Clostridium spp. JN605802 664 100
1-2,2-5,3-5,4-5,6-5,7-5,8-5, 9-4,11-5,12-5,13-5,14-2 C. sardiniense FJ546743 681 99
1-3,2-6,3-6,4-6,5-3,6-5,7-6,8-6,9-5,10-1,11-6,12-6,13-614-3,15-1 Escherichia fergusonii HE612113 1211 100
1-4,2-7,3-7,4-7,5-4,6-7,7-7,8-7,9-6,10-2,11-7,12-7,13-7, 14-4,15-2 Enterococcus faecium JQ778275 1473 99
1-5,2-8,3-8,4-8,5-5,6-8,7-8,8-8,9-7,10-311-8,12-8,13-8,14-5,15-3,17-6,22-5,27-7 E. coli HQ622348 1511 100
2-1,3-1,4-1,6-1,7-1,8-1,9-1, 11-1,12-1,13-1 P. anaerobius GQ496449 300 100
2-2,2-3,3-2,3-3,4-2,4-3,5-1, 5-2,6-2,6-3,7-2,7-3,8-2,8-3,9-2,11-211-3,12-2,12-3,13-2,13-3 Bacteroides vulgatus JF298877 540 99
16-1,17-1,18-1,19-1,20-1,21-1,23-1,24-1,25-1,26-1,27-1,28-1,29-1,30-1 Clostridium spp. AM774623 354 99
16-2.17-2,18-2,19-2,20-3,21-1,22-2,23-2, 24-2,25-2,26-2,28-2,28-3,29-2,30-2 Uncultured bacterium JF256482 644 100
16-3,17-3,18-3,19-4,20-4,21-3,22-2,23-3,24-3,25-3,26-3,27-2,28-4,29-4,30-5 Bacteroides spp. AM117579 821 100
16-4,18-4,19-5,20-5,21-4,23-4,24-4,25-4,26-4,27-3,28-5,29-5,30-6 Bifidobacterium spp. AM117580 845 99
16-6,17-4,18-5,19-6,20-7,21-5,22-3,23-5,24-5,25-6,26-5,28-6,29-7,30-8 Lactobacillus spp. JH164960 936 99
16-7,17-6,18-6,20-8,21-5,22-5,23-7,24-7, 25-7.26-6,27-5,28-8,29-8,30-8 B. infantis HQ591348 1369 99
16-5,20-6,25-5,27-4,29-6,30-7 P. bacterium AXYJ01000008 1222 100

ai - i′ stands for the i′th band of the i th lane in Figure 1.