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. Author manuscript; available in PMC: 2016 Jun 7.
Published in final edited form as: Biopolymers. 2014 Nov;102(6):444–455. doi: 10.1002/bip.22569

Table 2.

Determination of PBD Selectivity

Kd (nM)a
Entry Compd.b PBD1 PBD2c PBD3c
1 2a* 12 400 [33×] 306 [25×]
2 3c* 2 43 [21] 240 [120]
3 3m* 3 24 [8] 62 [20]
a

Determined by fluorscence polarization assays using FITC-labeled ligands.

b

Designation with an “*” indicates the presence of an N-terminal PEG-FITC group as described in Figure S5.

c

Values in brackets refer to the fold-change in binding affinity relative to PBD1. Binding curves are shown in Figure S6.