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. 2016 Jun 7;3:160025. doi: 10.1038/sdata.2016.25

Table 5. Illumina paired end WGS statistics.

Genome Coverage (x) Read length percent duplicate paired reads Fragment Length Median (bp) Fragment length standard deviation (bp) read 1 percent aligned read 2 percent aligned read 1 mismatch rate (%) read 2 mismatch rate (%)
Statistics were calculated using Illumina BaseSpace Isaac Whole Genome Sequencing v3 analysis pipeline and summarized by genome.                  
HG002 290 2×150 1.3 567 150 95.6 94.2 0.49 0.73
HG003 294 2×150 1.3 562 146 94.8 93.2 0.49 0.73
HG004 324 2×150 1.3 562 143 96.0 93.8 0.49 0.84
HG005 306 2×250 3.9 577 154 96.7 94.6 0.97 1.58
GM24694 105 2×150 3.7 560 146 95.8 93.9 0.51 0.78
GM24695 106 2×150 3.5 560 140 96.2 93.9 0.49 0.83