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New gene-protein-reaction (GPR) associations added in the E. coli model augmented with underground metabolic reactions, according to the experimental studies in [10]
| Reaction name | GPR in iJO1366 | GPR in this study |
|---|---|---|
| Aspartate transaminase | aspC | aspC OR tyrB |
| Tyrosine transaminase | aspC OR tyrB | aspC OR tyrB OR ilvE |
| Acetylornithine transaminase | argD OR astC | argD OR astC OR gabT OR puuE |
| Succinyldiaminopimelate transaminase | argD | argD OR astC OR gabT OR puuE |
| Citrate synthase | gltA | gltA OR prpC |
