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. 2016 May 19;113(22):E3120–E3129. doi: 10.1073/pnas.1603146113

Table S2.

Pairwise sequence alignment of WbbB1–401 with 33 proteins (domains) from the phylogenetic analysis, using the “BLAST 2 sequences” tool

Abbreviation % Identity % Similarity Overlap (aa) E value QXXXD, HP
Rt_WbbB 100 100 401 0 +
Kp_WbbB 67 80 401 0 +
Sm_WbbK 43 61 384 4e-110 +
Ah_WbbB 45 60 381 6e-108 +
Sf_28220 28 42 208 1e-12 +
Ec_Orf3 25 40 299 1e-10 +
Pa_WpaF 26 40 282 3e-10 +
Sf_Cps10C 27 43 199 7e-10 +
Sm_RkpZ 27 48 125 1e-09 +
Bo_2445 31 44 110 2e-09 +
Ap_Cps10C 24 41 197 5e-09 +
Cs_WepM 34 54 68 2e-08
Cj_KpsC-C 29 47 110 2e-08 +
Nm_KpsC-C 32 47 107 3e-08 +
Ec_KpsC-C 30 43 122 7e-08 +
Cs_KpsC-C 31 43 120 8e-08 +
Hi_KpsC-N 27 41 77 2e-07 HP
Ec_KpsC-N 26 42 76 1e-06 HP
Ec_KpsS 27 44 116 4e-06 +
Cs_KpsC-N 26 43 163 5e-06 +
Cj_KpsS 59 66 27 1e-05
Nm_CseA 23 38 254 2e-05 +
Hi_KpsC-C 29 43 107 2e-05 +
Sm_Rkpz1 27 37 116 2e-05 +
Cs_KpsS 41 58 34 5e-05
Ec_Orf2 42 60 33 1e-04
Sm_Rkpz2 30 42 109 1e-04 +
Cj_KpsC-N 21 42 109 1e-04 +
Hi_KpsS 25 47 69 8e-04
Nm_KpsS 25 41 111 0.002 D, HP
SM_b20824 22 35 229 0.015 +
Nm_KpsC-N 21 35 259 0.034 +
Ap_Cps5B 34 50 32 0.093

The protein abbreviations, accession numbers and amino acids range for multidomain proteins are given in Table S1. The last column identifies whether the conserved QXXXD and HP motifs are present (or not) in the aligned region; in some cases single motifs or residues were found and these are specifically indicated.