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. 2016 May 16;113(22):E3101–E3110. doi: 10.1073/pnas.1520255113

Table 2.

The 20 most up- and down-regulated genes in rsp mutant compared with wild-type

Gene* Fold-change Product
Up-regulated in rsp mutant
 0693 6.00 Putative lipoprotein
 0692 5.82 Conserved hypothetical protein
 0409 5.10 Conserved hypothetical protein
 1056 4.53 Conserved hypothetical protein
efb 4.23 Fibrinogen-binding protein
saeR 4.06 DNA-binding response regulator SaeR
saeS 4.00 Sensor histidine kinase SaeS
 1918 3.36 Truncated β-hemolysin
hlgA 3.34 Gamma-hemolysin component A
ureC 3.23 Urease, α-subunit
 0108 3.20 Antigen, 67 kDa
 1052 3.182 Fibrinogen-binding protein
ureB 3.160 Urease, β-subunit
 0274 3.117 Conserved hypothetical protein
 0278 3.095 Conserved hypothetical protein
 0273 3.031 Putative membrane protein
hlgC 3.010 Gamma-hemolysin component C
 2524 3.010 Conserved hypothetical protein
 0272 2.868 Conserved hypothetical protein
 0238 2.848 Transcriptional antiterminator, BglG family
lukA (G) 2.828 Leukocidin LukA/G
Down-regulated in rsp mutant
 2493 0.56 Conserved hypothetical protein
 2311 0.56 Conserved hypothetical protein
entB 0.55 Isochorismatase
sdrC 0.55 SdrC protein
grpE 0.54 Cochaperone GrpE
hrcA 0.53 Heat-inducible transcription repressor
 2310 0.53 Conserved hypothetical protein
arsR 0.51 Arsenical resistance operon repressor
 2245 0.49 Staphylococcal accessory regulator R
 0372 0.48 Putative lipoprotein
 0225 0.48 Putative acyl-CoA acetyltransferase FadA
fadD 0.470 Acyl-CoA dehydrogenase FadD
 0226 0.463 3-hydroxyacyl-CoA dehydrogenase
arcA 0.460 Arginine deiminase
fadE 0.454 Acyl-CoA synthetase FadE
 0229 0.444 Putative acyl-CoA transferase FadX
 2453 0.435 ABC transporter, ATP-binding protein
 2306 0.435 ABC transporter, ATP-binding protein
 2307 0.297 ABC transporter, permease protein
 0179 0.255 Putative d-isomer specific 2-hydroxyacid dehydrogenase
SSR42 0.004 Small stable RNA 42
*

Gene symbol or last four digits of locus tag (i.e., 0238 represents SAUSA300_0238).