Table 1.
Target gene | PCR | Name of the PCR primer used | Sequence (5′–3′) | Annealing temperature | Amplicon size (bp) | Reference |
---|---|---|---|---|---|---|
Bartonella spp. ITS | 1st | QHVE1 | TTCAGATGATGATCCCAAGC | 58 | 735 | [21] |
QHVE4 | AACATGTCTGAATATATCTTC | |||||
2nd | QHVE12 | CCGGAGGGCTTGTAGCTCAG | 58 | 484 | ||
QHVE14 | CACAATTTCAATAGAAC | |||||
Anaplasma spp.16S rRNA | 1st | AE1-F | AAGCTTAACACATGCAAGTCGAA | 56 | 1,406 | [21] |
AE1-R | AGTCACTGACCCAACCTTAAATG | |||||
Anaplasma phagocytophilum 16S rRNA | 2nd | EE3 | GTCGAACGGATTATTTTTATAGCTTGC | 56 | 926 | |
EE4 | CCCTTCCGTTAAGAAGGATCTAATCTCC | |||||
Anaplasma bovis 16S rRNA | 2nd | ABkf | TAGCTTGCTATGGGGACAA | 59 | 547 | |
ABlr | TCTCCCGCACTCCAGTCTG | |||||
Ehrlichia spp. 16S rRNA | 1st | ECC | AGAACGAACGCTGGCGGCAAGC | 56 | 450 | [22] |
ECB | CGTATTACCGCGGCGCTGGCA | |||||
Ehrlichia chaffeensis 16S rRNA | 2nd | HE3 | TATAGGTACCGTACTTATCTTCCCTAT | 56 | 390 | |
HE1 | CAATTGCTTATAACCCTTTTGGTTATAAAT | |||||
Ehrlichia canis 16S rRNA | 2nd | HE3 | TATAGGTACCGTACTTATCTTCCCTAT | 56 | 365 | |
ECAN5 | CAATTATTTATAGCCTCTGGCTATAGGC | |||||
Borrelia burgdoferi 16S rRNA | 1st | B1 | CAGTGCGTCTTAAGCATGC | 59 | 1,427 | [21] |
B8 | CCTTAAATACCTTCTCCC | |||||
2nd | B3 | GCAGCTAAGAATCTTCCGCAATGG | 60 | 714 | ||
B6 | CAACCATGCAGCACTGTATAT | |||||
Rickettsia sp. gltA | 1st | RpCS. 877p | GGGGACCTGCTCACGGCGG | 54 | 382 | [23] |
RpCS. 1258n | ATTGCAAAAAGTACAGTGAA | |||||
2nd | RpCS. 896p | GGCTAATGAAGCAGTGATAA | 58 | 338 | ||
RpCS. 1233n | GCGACGGTATACCCATAG | |||||
Wolbachia 16S rRNA | 16S-F | TTGTAGCCTGCTATGGTATAACT | 56 | 937 | [24] | |
16S-R | GAATAGGAGTTTTCATGT | |||||
mt DNA cytochrome b gene | L14841 | AAAAAGCTTCCATCCAACATCTCAGCATGATG | 50 | 450 | [25] | |
H15149 | AAACTGCAGCCCCTCAGAATGATATTTGTCCTCA |