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. 2016 Jun 9;4:23. doi: 10.1186/s40168-016-0169-y

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© Adler et al. 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Differentially abundant genera between the oral microbiomes of cats on dry and wet diets. DESeq was used to test for the presence of differentially abundant operational taxonomic units (OTUs) in the oral microbiome of the cats on a dry- compared to wet-food diet (Phyloseq version 1.10.0). The DESeq test was applied to OTUs that had been filtered to remove singletons and species with an abundance below 0.005 %. The figure presents those OTUs that were found to be significantly different (p < 0.01) between the two diets. Positive log₂-fold change values indicate enriched OTUs in the dry diet, and negative log₂-fold change values indicate enriched OTUs in the cats eating a wet diet. Abbreviation: NA non-assigned