TABLE 3.
Inhibitor | KDa | IC50b | Kic | pIC50d | ΔTme |
---|---|---|---|---|---|
μm | μm | μm | °C | ||
PJ34 | 14 ± 0.5 | 12 ± 1 | 3 ± 0.2 | 4.9 | 2.4 ± 0.3 |
P6-C | 25 ± 1 | 89 ± 4 | 19 ± 1 | 4.1 | 2.2 ± 0.6 |
P6-D | 42 ± 5 | 97 ± 7 | 18 ± 1 | 4.0 | 1.8 ± 0.4 |
P6-E | 50 ± 6 | 119 ± 2 | 24 ± 0.3 | 3.9 | 2.6 ± 0.7 |
P6-F | NDf | 38 ± 2 | 7 ± 0.2 | 4.4 | 1.5 ± 0.5 |
a The binding affinity of inhibitors to Scabin was measured by the quenching of the intrinsic Trp fluorescence caused by the binding of the ligand to the enzyme active site.
b The IC50 values were determined by fitting each dose-response curve to a Boltzmann sigmoidal function in MicroCal Origin version 8.0.
c The inhibition constant (Ki) was calculated from the experimentally determined IC50 values according to the relationship, Ki = IC50/(1 + ([SNAD]/Km(NAD)) using fixed values for [Scabin] = 10 μm, [ϵ-NAD+] = 400 μm, and Km(ϵ-NAD+) = 276 μm.
d The pIC50 values were calculated from the IC50 values as follows, pIC50 = −log IC50. The higher the pIC50 value, the lower dose that is required for 50% inhibition of Scabin toxin activity.
e The ΔTm value (°C) was determined by the expression, ΔTm°C(Scabin-inhibitor) − ΔTm°C (Scabin-apo).
f Not determined.