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. 2016 Jun 10;16:133. doi: 10.1186/s12870-016-0826-0

Table 5.

Most significant p-values revealed by the association between classes of carotenoid types and abundance of transcript coding for enzymes related to carotenoid biosynthesis obtained with microarray data

Enzyme Correlation (r) S.E. of r Significance P (r = 0) n
Total Cyclic Carotenoids
   PSY 0.262 0.042 * 5
   PDS 0.513 0.438 ns 5
   ZCD 0.420 0.200 ns 5
   CRTISO 0.486 0.347 ns 5
   LYCb 0.073 0.001 *** 5
   HYb 0.575 0.885 ns 5
   NXS 0.575 0.877 ns 5
TOTAL Acyclic Carotenoids
   PSY 0.648 0.597 ns 5
   PDS 0.611 0.496 ns 5
   ZCD 0.706 0.954 ns 5
   CRTISO 0.424 0.200 ns 5
   LYCb 0.703 0.893 ns 5
   HYb 0.616 0.509 ns 5
   NXS 0.616 0.508 ns 5
TOTAL β − carotene
   PSY 0.423 0.199 ns 5
   PDS 0.664 0.655 ns 5
   ZCD 0.536 0.348 ns 5
   CRTISO 0.625 0.531 ns 5
   LYCb 0.048 0.002 ** 5
   HYb 0.707 0.960 ns 5
   NXS 0.706 0.952 ns 5
TOTAL Xanthophylls
   PSY 0.343 0.126 ns 5
   PDS 0.052 0.003 ** 5
   X ZCD 0.653 0.616 ns 5
   CRTISO 0.701 0.870 ns 5
   LYCb 0.663 0.653 ns 5
   HYb 0.264 0.072 ns 5
   NXS 0.259 0.0706 ns 5

Carotenoid intermediates were pooled based on classes of carotenoid for end products of group of reactions type as illustrated in Fig. 2. Pearson product moment correlation coefficient (r) was obtained for linear association of total cyclic, total acyclic, total β − carotene, and total β_xanthophylls content (μg/g DWt) against abundance of transcripts coding for enzyme related to carotenoids synthesis. The values of SE of r accounts for the standard error of the estimates by the linear regression and represents the level of accuracy of predictions. If probability that r = 0 P(r = 0) is < =0.05, r is significantly different from 0 and some degree of correlation is shown. *significant, **highly significant, ***most significant. Relevant cDNA sequences were annotated to the cassava