Table 3. IgH and IgL diversity estimates.
The “SPECIES” module for R was used to estimate the diversity of the combinations of germline V, D, and J segments (IgH chain) or V and J segments (light chain) in the population of antibodies specific for HA, based on sampled IgH and IgL sequences. Estimates and 95% confidence intervals (CI) are shown for each method.
VDJ (H)
|
VJ (L)
|
|||
---|---|---|---|---|
Estimate | 95% CI | Estimate | 95% CI | Reference |
|
|
|||
113 | 55–321 | 35 | 29–60 | Chao (1984) |
75 | 47–148 | 38 | 30–60 | Chao & Lee (1992) (ACE method) |
92 | 51–223 | 38 | 29–63 | Chao & Lee (1992) (ACE-1 method) |
72 | 40–171 | 35 | 28–60 | Chao & Bunge (2002) |
111 | 63–159 | 39 | 29–49 | Burnham & Overton (1978), Burnham & Overton (1979) |
129 | 47–251 | 38 | 28–80 | Wang & Lindsay (2005) |
97 | 63–114 | 37 | 32–71 | Wang (2010) |