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. 2016 Apr 29;59(11):5416–5431. doi: 10.1021/acs.jmedchem.6b00275

Table 1. Structure–Activity Relationshipsa.

graphic file with name jm-2016-00275r_0009.jpg

      IC50 (μM)
 
compd R Ar/R1 PfDHODH PvDHODH hDHODH EC50 (μM) Pf3D7 cellsd
1 CF2CH3 4-SF5–Ph 0.0089 (0.0073–0.011) 0.027 (0.023–0.032) >100 0.0043–0.0078
2 H 2-naphthyl 0.047 0.23 >100 0.068
3 H 4-CF3–Ph 0.28 2.6 >100 0.34
5 CF2CH3 H 0.021 (0.019–0.024) 0.035 (0.030- 0.041) ND 0.0028 (0.0022–0.0037)
6 CF2CH3 6-F 0.024 (0.021–0.027) 0.056 (0.048–0.066) >100 0.0075 (0.0063–0.0089)
7 CF2CH3 6-Cl (E-I) 0.0037 (0.0021–0.0066) 0.029 (0.019–0.042) >100 0.0038 (0.0030–0.0049)
8 CF2CH3 6-Cl (E-II) 1.34 (1.1–1.7) ND >100 0.42 (0.37–0.47)
9 CF2CH3 7-Cl (E-I, S) 0.0063 (0.005–0.008) 0.010 (0.0083- 0.013) >100 0.0012 (0.0011–0.0013)
10 CF2CH3 7-Cl (E-II, R) 0.79 (0.70–0.94) ND >100 2.8 (1.0–7.8)
11 CF2CH3 6-Br (E-I)b 0.0046 (0.0038- 0.0056) 0.024 (0.021–0.027) >100 0.0026 (0.0016–0.0042)
12 CF2CH3 6-Br (E-II)c 0.79 (0.59–1.1) 2.1 (1.8–2.5) >100 0.14 (0.090–0.21)
13 CF2CH3 7-Br (E-I) 0.0046 (0.0036–0.006) 0.012 (0.010–0.013) >100 0.00039 (0.00034–0.00044)
14 CF2CH3 7-Br (E-II) 0.64 (0.53–0.77) ND >100 1.4 (1.2–1.5)
15 CF2CH3 6-OMe 0.14 (0.11–0.16) 0.22 (0.20–0.25) >100 0.017 (0.014–0.019)
16 CF2CH3 7-OMe (E-I) 0.021 (0.018–0.024) 0.13 (0.11–0.15) >100 0.025 (0.023–0.026)
17 CF2CH3 7-OMe (E-II) 1.0 (0.86–1.2) ND ND 0.64 (0.56–0.75)
18 CF2CH3 6,7-di-F (E-I) 2.3 (1.9–2.8) ND ND >2.5
19 CF2CH3 6,7-di-F (E-II) 0.060 (0.049–0.072) 0.071 (0.066–0.076) ND 0.022 (0.018–0.026)
20 CF2CH3 6-F,7- CF3 0.089 (0.078–0.10) 0.39 (0.34–0.44) >100 0.097 (0.080–0.12)
21 CF2CH3 6- CF3, 7-F 0.087 (0.067–0.11) 0.82 (0.69–0.96) >100 3.3 (2.97–3.63)
22 CF3 H 0.17 (0.12–0.23) ND >100 0.021 (0.017–0.025)
23 CF3 6-F 0.077 (0.066–0.089) 0.28 (0.25–0.33) ND 0.066 (0.062–0.07)
24 CF3 7-Cl (E-I) 0.015 (0.012–0.018) ND >50 0.033 (0.030–0.035)
25 CF3 7-Cl (E-II) 1.1 (0.98–1.2) ND ND 1.5 (1.2–1.7)
26 CF2CH3 H 0.048 (0.040–0.059) ND >100 0.036 (0.031–0.042)
27 CF2CH3 5-Br 0.11 (0.083–0.14) ND ND 0.59 (0.25–1.4)
28 CF2CH3 5-Cl 0.085 (0.075–0.097) ND ND 0.12 (0.0.045–0.20)
29 CF2CH3 5,6-di-Cl 0.14 (0.11–0.17) ND ND 0.58 (0.22–1.5)
30 CF2CH3 5-SO2Me 4.0 (2.7–6.1) ND ND 6.5 (4.9–8.1)
31 CF2CH3 5-SO2NMe2 8.0 (6.7–9.7) ND ND ND
32 CF2CH3 4,7-di-Me 0.014 (0.012- 0.017) 0.024 (0.022- 0.027) >100 0.00039 (0.00021–0.00075)
33 CF2CH3 4,7-di-F 0.065 (0.057–0.075) 0.15 (0.14–0.16) >100 0.046 (0.002–0.0048)
34 CF2CH3 4-F 0.052 (0.041–0.066) 0.3 (0.26–0.34) >100 0.064 (0.061–0.066)
35 CF2CH3 5,6-di-F 0.052 (0.042–0.064) 0.37 (0.28–0.50) >100 0.040 (0.035–0.044)
36 CF2CH3 4-CF3 0.066 (0.054–0.080) 0.28 (0.22–0.34) >100 0.0043 (0.0029–0.0056)
37 CF3 5,6-di-F 0.12 (0.11–0.14) ND ND 0.15 (0.092–0.23)
a

DHODH IC50 and P. falciparum EC50 values were determined from triplicate data points at each concentration in the dose titration. Values in parentheses represent the 95% confidence interval of the fit.

b

Enantiomer-I is the second eluted on the chiral column.

c

Enantiomer-II is the first eluted on the chiral column.

d

Data were collected using albumax unless otherwise stated. Data for 2(15) and 3(16) were taken from previous reports. Compound 1 has been previously profiled in these assays, and parasite data were previously reported.11,12 Enzyme data were recollected herein to serve as a direct comparator.