Table 2.
Correlation analyses |
Materials |
|||||||
---|---|---|---|---|---|---|---|---|
Reference | Phenotype of interest | Tested for correlation with | Corr. | p value | Test | Analyzed | Tissue/Serum | Sample size |
Apaf-1 | ||||||||
Fujimoto et al.34 | APAF-1 LOH | Overall survival | no | 0.43 | Log-rank test | gDNA | tissue | 52 PMs |
APAF-1 LOH | Overall survival | yes | 0.049 | Log-rank test | gDNA | tissue | 97 MMs | |
Fujimoto et al.35 | APAF-1 LOH | Overall survival | yes | 0.046 | Log-rank test | gDNA | serum | 44 MMs |
Niedlojadlo et al.36 | Apaf-1 mRNA expression | Clark level | yes | 0.03 | Pearson's corr coeff | mRNA | tissue | 53 PMs |
Apaf-1 mRNA expression | Breslow thickness | no | 0.38 | Pearson's corr coeff | mRNA | tissue | 53 PMs | |
Apaf-1 protein expression | Clark level | yes | 0.037 | Pearson's corr coeff | protein | tissue | 53 PMs | |
Apaf-1 protein expression | Breslow thickness | no | 0.23 | Pearson's corr coeff | protein | tissue | 53 PMs | |
Dai et al.39 | Apaf-1 protein expression | Breslow thickness | no | > 0.05 | Chi-square | protein | tissue | 70 PMs |
Apaf-1 protein expression | Tumor ulceration | no | > 0.05 | Chi-square | protein | tissue | 70 PMs | |
Apaf-1 protein expression | 5-year survival | no | > 0.05 | Log-rank test | protein | tissue | 70 PMs | |
Zanon et al.40 | Apaf-1 protein expression | Patient survival | no | Unknown | Unknown | protein | tissue | 16 PMs + 66 MMs |
Bachmann et al.41 | Apaf-1 protein expression | Tumor thickness | yes | 0.05 | Unknown | protein | tissue | 153 mixed samples |
Apaf-1 protein expression | Overall survival | no | 0.095 | Log-rank test | protein | tissue | 153 mixed samples | |
Caspases | ||||||||
Woenckhaus et al.49 | Active caspase-3 expression | Survival time | no | > 0.5 | Cox regression | protein | tissue | 66 mixed samples |
Active caspase-6 expression | Survival time | no | > 0.5 | Cox regression | protein | tissue | 66 mixed samples | |
XIAP | ||||||||
Hiscutt et al.55 | XIAP protein expression | Stage | yes | < 0.001 | Wald chi-square | protein | tissue | 55 mixed samples |
ML-IAP | ||||||||
Gong et al.57 | ML-IAP protein expression | Patient age | yes | 0.0056 | Spearman rank corr | not specified | tissue | 48 mixed samples |
Takeuchi et al.58 | ML-IAP mRNA expression | Overall survival | no | > 0.05 | Unknown | mRNA | tissue | 63 MMs |
Nachmias et al.59 | ML-IAP protein expression | Response to treatment | yes | 0.02 | Fisher's exact test | protein | tissue | 27 PMs |
XAF1 | ||||||||
Ng et al.65 | XAF1 protein expression | Tumor thickness | no | 0.119 | Chi-square | protein | tissue | 70 PMs |
XAF1 protein expression | 5-year survival | no | 0.889 | Log-rank test | protein | tissue | 69 PMs | |
XAF1 nuclear positivity | 5-year survival | no | 0.896 | Log-rank test | protein | tissue | 69 PMs |
Abbreviations used: Coeff, coefficient; Corr, correlation.