. 2016 Feb 10;202(4):1503–1521. doi: 10.1534/genetics.115.185017

Table 3. Two-sample t-test (4 df) with Holm-Bonferroni correction comparing ancestral against evolved lineages.

			Accumulation		Within-host fitness
	Genotype	Lineage	t	P	t	P
2 NIb copies	TEV-NIb₁-NIb₉	9WL1	−11.744	<0.001^a	−3.101	0.036
		9WL2	−14.697	<0.001^a	−5.610	0.005^a
		9WL3	−9.690	0.001^a	−3.663	0.022
		9WL4	−27.962	<0.001^a	−10.713	<0.001^a
		9WL5	−29.966	<0.001^a	−2.991	0.040
	TEV-NIb₂-NIb₉	9WL1	−9.305	0.001^a	−4.849	0.003^a
		9WL2	−3.284	0.030^a	−4.358	0.012^a
		9WL3	−5.600	0.005^a	−12.814	<0.001^a
		9WL4	−8.222	0.001^a	−5.348	0.006^a
		9WL5	−8.832	0.001^a	−1.405	0.233
	TEV	9WL1	1.3475	0.249	−4.836	0.008^a
		9WL2	−0.2692	0.801	−2.549	0.063
		9WL3	−0.4693	0.663	−3.542	0.024
		9WL4	−0.5268	0.626	−1.782	0.149
		9WL5	−0.7859	0.476	−4.028	0.016
1 NIb copy, alternative position	TEV-NIb₁-ΔNIb₉	9WL1	−1.521	0.203	−0.395	0.713
		9WL2	−6.133	0.004^a	15.041	<0.001^a
		9WL3	−2.534	0.064	−0.515	0.634
		9WL4	−9.322	0.001^a	19.454	<0.001^a
		9WL5	−7.363	0.002^a	3.986	0.016
		9WL6	−8.738	0.001^a	2.652	0.057
		9WL7	−5.670	0.005^a	17.220	<0.001^a
	TEV-NIb₂-ΔNIb₉	9WL1	−16.224	<0.001^a	3.139	0.035
		9WL2	−11.531	<0.001^a	0.805	0.466
		9WL3	−16.134	<0.001^a	4.564	0.010
		9WL4	−9.068	0.001^a	−0.989	0.379
		9WL5	−13.961	<0.001^a	−0.502	0.642
		9WL6	−14.943	<0.001^a	−3.544	0.024
		9WL7	−4.320	0.012^a	2.374	0.077
	TEV	9WL1	1.377	0.241	−3.311	0.030
		9WL2	0.986	0.380	−2.152	0.098
		9WL3	0.476	0.659	−1.674	0.170
		9WL4	0.908	0.415	−1.642	0.176
		9WL5	1.464	0.217	−1.867	0.135
		9WL6	0.621	0.569	−2.388	0.075
		9WL7	0.497	0.646	−2.865	0.046

Significant after Holm-Bonferroni correction.