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. Author manuscript; available in PMC: 2016 Jun 13.
Published in final edited form as: Calcif Tissue Int. 2009 Oct 29;85(6):507–513. doi: 10.1007/s00223-009-9307-x

Table 1.

Characteristics of the 17 tagging SNPs in the NPY gene

SNP Base Change Position in NPY Minor allele frequency
Afro-Caribbeans HapMap YRIa
rs10951003 G→A Upstream 0.087 0.083
rs12700524 T→C Upstream 0.100 0.117
rs3905497 C→G Upstream 0.129 0.142
rs16479 A→G Upstream 0.063 0.067
rs16149 G→A Upstream 0.340 0.322
rs16148 C→T Upstream 0.453 0.474
rs3025123 C→G Intron 1 0.060 0.086
rs16143 C→T Intron 1 0.399 0.333
rs3025118 G→T Intron 2 0.063 0.068
rs16477 G→A Intron 2 0.164 0.167
rs16135 A→G Intron 2 0.055 0.075
rs16131 T→C Intron 3 0.073 0.042
rs16130 C→T Intron 3 0.164 0.150
rs16476 T→G Intron 3 0.370 0.397
rs5576 A→G 3′ UTR 0.051 0.050
rs2189495 A→G Downstream 0.427 0.492
rs16123 A→G Downstream 0.056 0.060
a

YRI indicates HapMap Yoruba sample from Ibadan, Nigeria