Table 1.
SNP | Base Change | Position in NPY | Minor allele frequency
|
|
---|---|---|---|---|
Afro-Caribbeans | HapMap YRIa | |||
rs10951003 | G→A | Upstream | 0.087 | 0.083 |
rs12700524 | T→C | Upstream | 0.100 | 0.117 |
rs3905497 | C→G | Upstream | 0.129 | 0.142 |
rs16479 | A→G | Upstream | 0.063 | 0.067 |
rs16149 | G→A | Upstream | 0.340 | 0.322 |
rs16148 | C→T | Upstream | 0.453 | 0.474 |
rs3025123 | C→G | Intron 1 | 0.060 | 0.086 |
rs16143 | C→T | Intron 1 | 0.399 | 0.333 |
rs3025118 | G→T | Intron 2 | 0.063 | 0.068 |
rs16477 | G→A | Intron 2 | 0.164 | 0.167 |
rs16135 | A→G | Intron 2 | 0.055 | 0.075 |
rs16131 | T→C | Intron 3 | 0.073 | 0.042 |
rs16130 | C→T | Intron 3 | 0.164 | 0.150 |
rs16476 | T→G | Intron 3 | 0.370 | 0.397 |
rs5576 | A→G | 3′ UTR | 0.051 | 0.050 |
rs2189495 | A→G | Downstream | 0.427 | 0.492 |
rs16123 | A→G | Downstream | 0.056 | 0.060 |
YRI indicates HapMap Yoruba sample from Ibadan, Nigeria