Table 1. Number of barcodes and range of sequence frequencies identified in uninfected-, BCGhigh and BCGlow THP1 cells.
Condition | Number of reads* | Percent of sequences Q score >30 | Number of barcodes identified* | Number of single shRNAs | Range of sequence frequencies |
---|---|---|---|---|---|
Uninfected | 53.9 | 68.1 | 35.02 | 27,495 | 6–8, 281 |
Sort 1_BCGhigh | 36 | 86.4 | 29.9 | 27,483 | 1–8, 046 |
Sort 2_BCGlow | 31 | 61.9 | 17.61 | 24,502 | 1–107, 809 |
Sort 3_BCGlow | 33.6 | 84.7 | 25.3 | 22,666 | 1–268, 377 |
*(×10−6).