Table 1.
GO term categoryc | Differentially (ratio ≥ 7) expresseda | Similarly (ratio < 1.25) expresseda | ||||
---|---|---|---|---|---|---|
FDRb | Subset ratio | GO term | FDRb | Subset ratio | GO term | |
Molecular function | 0.0230 | 50 % | catalytic activity | |||
0.0360 | 20 % | hydrolase activity | ||||
0.0083 | 14 % | transporter activity | ||||
0.0100 | 10 % | substrate-specific transporter activity | ||||
0.0230 | 10 % | transmembrane transporter activity | ||||
Biological process | 0.0430 | 48 % | cellular process | |||
0.0006 | 29 % | response to stimulus | ||||
0.0190 | 23 % | cellular biosynthetic process | ||||
0.0330 | 23 % | biosynthetic process | ||||
0.0007 | 19 % | response to stress | ||||
Cellular component | 0.0110 | 36 % | cytoplasm | 0.0390 | 10 % | plasma membrane |
0.0087 | 35 % | cytoplasmic part | 0.0180 | 7 % | cytosol | |
0.0098 | 26 % | membrane | 0.0330 | 5 % | ribonucleoprotein complex | |
0.0017 | 16 % | plasma membrane | 0.0120 | 4 % | cytosolic part | |
0.0110 | 36 % | cytosol | 0.0300 | 4 % | ribosome |
aFor each pair, the gene with higher expression was selected for analysis
bFalse Discovery Rate (FDR)
cFor each GO term category, the five entries with the highest Subset ratio are shown