Table 1. Results on an E. coli dataset using PacBio sequencing.
Program | Coverage | N50 | # | Time | Memory | Err1 | Err2 | Err4 |
---|---|---|---|---|---|---|---|---|
Sparc | 10× PB | 1.06 MB | 11 | 0.5 m | 308 MB | 1.95% | 1.51% | 1.50% |
PBdagcon | 10× PB | 1.06 MB | 11 | 3.0 m | 1.10 GB | 1.95% | 1.52% | 1.51% |
Sparc | 10× Hybrid | 1.06 MB | 11 | 0.5 m | 237 MB | 0.19% | 0.09% | 0.06% |
PBdagcon | 10× Hybrid | 1.06 MB | 11 | 3.0 m | 1.23 GB | 1.02% | 0.64% | 0.58% |
Sparc | 30× PB | 4.74 MB | 2 | 1.3 m | 2.30 GB | 0.41% | 0.16% | 0.11% |
PBdagcon | 30× PB | 4.74 MB | 2 | 9.3 m | 7.70 GB | 0.49% | 0.23% | 0.18% |
Sparc | 30× Hybrid | 4.74 MB | 2 | 1.3 m | 2.14 GB | 0.17% | 0.02% | 0.02% |
PBdagcon | 30× Hybrid | 4.74 MB | 2 | 9.7 m | 9.58 GB | 0.49% | 0.18% | 0.13% |