Table 3.
List of the primer pairs used for qRT-PCR experiments and to synthesise riboprobes
| qRT-PCR primers | |||
|---|---|---|---|
| Gene | Forward primer 5′–3′ | Reverse Primer 5′–3′ | Product length |
| pde6a | CAGTCAACAAGATCGGGGCT | GCTCAGGTGAAACACTCGGA | 104 bp |
| pde6b | ACTCACGACAGGCAAACTGA | CATGCAGCTTGGCTAGAGGA | 146 bp |
| pde6c | ACTCCTGATGGCAGGGAGAT | AGCAACATAGGTGGGCAGTC | 135 bp |
| pde6ga | CACAAGGGCCCACCTAAGTT | AACTCCAGGTGACTGTACGC | 164 bp |
| pde6gb | GTTCAAGAGCAAGCCCCCAA | GTGCCTAAACCTTCCATGCC | 75 bp |
| pde6ha | CTTCGGAGACGACATCCCAG | ATCGCTGAGCTCCATGTCTC | 94 bp |
| pde6hb | CCTGGACAGAAAGGGTTTGGT | CTGAGCTCCATGTCCCCGAA | 104 bp |
| pde6i | ACAACTACACCCAGAAGCGG | TGCCAAGACCATCCATTCCT | 127 bp |
| actb1 | GGCACGAGAGATCTTCACTCCCC | CCATGCCAACCATCACTCCCTGA | 195 bp |
| tuba1b | CGGAGCTGGAAAACACGTCCCC | TGGTCAGACAGTTTGCGAACCCTA | 216 bp |
| Probe primers | |||
| pde6ga | TCCACCAGCAACATCCTGCACC | CGCGCTATGGCAGACGCTGA | 679 bp |
| pde6gb | TCTGCCATGTCCTCCATCGGC | AGACGAGGCACCGAGGCACA | 381 bp |
| pde6ha | GGCGCTCTCAGGCCAACACA | AGGCACAAACACAATCTCATGCACA | 205 bp |
| pde6hb | TGGCCAAATACGGCATCATCT | CATCCATCGTGGCTGCTACA | 280 bp |
The current table specifies the primer pair sequences used to amplify gene sequences either to perform qRT-PCR or to synthesise the antisense and sense riboprobes used in ISH experiments. Actin beta I (actb1) and tubulin alpha 1b (tuba1b) were used as housekeeping genes in the qRT-PCR experiments