Table 1.

The most affected GO terms from Biological Processes in the stressed roots and percentage of differentially expressed genes (adjusted p-value ≤0.05) at the GO level 6.

GO number	GO term	Total #	% of affected genes
DOWN-REGULATED
GO:0010089	xylem development	13	69.23%
GO:0071103	DNA conformation change	104	59.62%
GO:0070726	cell wall assembly	11	54.55%
GO:0048544	recognition of pollen	91	50.55%
GO:0006915	apoptotic process	296	50.34%
GO:0051129	negative regulation of cellular component organization	10	50.00%
GO:0001666	response to hypoxia	16	50.00%
GO:0009664	plant-type cell wall organization	76	48.68%
GO:0046271	phenylpropanoid catabolic process	21	47.62%
GO:0007166	cell surface receptor signaling pathway	42	47.62%
GO:0009834	plant-type secondary cell wall biogenesis	19	47.37%
GO:0015851	nucleobase transport	13	46.15%
GO:0006002	fructose 6-phosphate metabolic process	11	45.45%
GO:0042886	amide transport	65	44.62%
GO:0000910	cytokinesis	106	43.40%
UP-REGULATED
GO:0071462	cellular response to water stimulus	11	63.64%
GO:0009407	toxin catabolic process	33	60.61%
GO:0072348	sulfur compound transport	10	60.00%
GO:1902644	tertiary alcohol metabolic process	22	59.09%
GO:0044242	cellular lipid catabolic process	97	57.73%
GO:0033015	tetrapyrrole catabolic process	35	57.14%
GO:0042538	hyperosmotic salinity response	20	55.00%
GO:0010286	heat acclimation	26	53.85%
GO:0046164	alcohol catabolic process	10	50.00%
GO:0046434	organophosphate catabolic process	12	50.00%
GO:0048545	response to steroid hormone	20	50.00%
GO:0050801	ion homeostasis	80	48.75%
GO:0055082	cellular chemical homeostasis	52	48.08%
GO:0042542	response to hydrogen peroxide	62	46.77%
GO:0009699	phenylpropanoid biosynthetic process	28	46.43%