Table 2.

The most affected GO terms from Biological Processes in the stressed aerial part and percentage of differentially expressed genes (adjusted p-value ≤0.05) at the GO level 6.

GO number	GO term	Total #	% of affected genes
DOWN-REGULATED
GO:0009765	photosynthesis, light harvesting	32	87.50%
GO:0019750	chloroplast localization	67	71.64%
GO:0051667	establishment of plastid localization	67	71.64%
GO:0009668	plastid membrane organization	123	70.73%
GO:0009658	chloroplast organization	146	67.12%
GO:0016226	iron-sulfur cluster assembly	70	62.86%
GO:0019682	glyceraldehyde-3-phosphate metabolic process	216	62.04%
GO:0051156	glucose 6-phosphate metabolic process	121	61.16%
GO:0033014	tetrapyrrole biosynthetic process	102	59.80%
GO:0042727	flavin-containing compound biosynthetic process	12	58.33%
GO:0010374	stomatal complex development	69	53.62%
GO:0009767	photosynthetic electron transport chain	57	50.88%
GO:0006720	isoprenoid metabolic process	255	49.02%
GO:0006778	porphyrin-containing compound metabolic process	138	47.83%
GO:0016143	S-glycoside metabolic process	60	46.67%
UP-REGULATED
GO:0042538	hyperosmotic salinity response	20	50.00%
GO:0009962	regulation of flavonoid biosynthetic process	11	36.36%
GO:0010647	positive regulation of cell communication	15	33.33%
GO:0006026	aminoglycan catabolic process	18	33.33%
GO:0046348	amino sugar catabolic process	18	33.33%
GO:1901071	glucosamine-containing compound metabolic process	18	33.33%
GO:0060548	negative regulation of cell death	29	31.03%
GO:0010583	response to cyclopentenone	14	28.57%
GO:0046271	phenylpropanoid catabolic process	21	28.57%
GO:0033015	tetrapyrrole catabolic process	35	28.57%
GO:0009414	response to water deprivation	68	27.94%
GO:1902644	tertiary alcohol metabolic process	22	27.27%
GO:0043067	regulation of programmed cell death	63	25.40%
GO:0006662	glycerol ether metabolic process	32	25.00%
GO:0009407	toxin catabolic process	33	24.24%