Table 3.

The most affected GO terms from Biological Processes in the aerial parts 12 h after re-watering and percentage of differentially expressed genes (adjusted p-value ≤0.05) at the GO level 6.

GO number	GO term	Total #	% of affected genes
DOWN-REGULATED
GO:0009765	photosynthesis, light harvesting	32	81.25%
GO:0071462	cellular response to water stimulus	11	63.64%
GO:0051156	glucose 6-phosphate metabolic process	121	53.72%
GO:0009767	photosynthetic electron transport chain	57	52.63%
GO:0019750	chloroplast localization	67	50.75%
GO:0051667	establishment of plastid localization	67	50.75%
GO:0072525	pyridine-containing compound biosynthetic process	20	50.00%
GO:0009637	response to blue light	49	48.98%
GO:0019682	glyceraldehyde-3-phosphate metabolic process	216	46.30%
GO:0010109	regulation of photosynthesis	13	46.15%
GO:0043085	positive regulation of catalytic activity	79	45.57%
GO:0016143	S-glycoside metabolic process	60	45.00%
GO:0006778	porphyrin-containing compound metabolic process	138	44.93%
GO:0009668	plastid membrane organization	123	44.72%
GO:0033014	tetrapyrrole biosynthetic process	102	43.14%
UP-REGULATED
GO:0042273	ribosomal large subunit biogenesis	14	71.43%
GO:0000741	karyogamy	25	64.00%
GO:0072528	pyrimidine-containing compound biosynthetic process	97	59.79%
GO:0000085	mitotic G2 phase	23	56.52%
GO:0043572	plastid fission	11	54.55%
GO:0006518	peptide metabolic process	498	49.20%
GO:0043604	amide biosynthetic process	512	48.44%
GO:0007292	female gamete generation	69	46.38%
GO:0007006	mitochondrial membrane organization	11	45.45%
GO:0051604	protein maturation	47	44.68%
GO:0006026	aminoglycan catabolic process	18	44.44%
GO:0046348	amino sugar catabolic process	18	44.44%
GO:1901071	glucosamine-containing compound metabolic process	18	44.44%
GO:0051169	nuclear transport	125	44.00%
GO:0009553	embryo sac development	110	43.64%